Candidatus Protochlamydia amoebophila: PC_RS05595
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Entry
PC_RS05595 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Pathway
pcu03030
DNA replication
pcu03430
Mismatch repair
pcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PC_RS05595
03430 Mismatch repair
PC_RS05595
03440 Homologous recombination
PC_RS05595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcu03032
]
PC_RS05595
03400 DNA repair and recombination proteins [BR:
pcu03400
]
PC_RS05595
Enzymes [BR:
pcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PC_RS05595
DNA replication proteins [BR:
pcu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PC_RS05595
DNA repair and recombination proteins [BR:
pcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PC_RS05595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
SPJ31788
UniProt:
A0A2P9H9W0
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All DBs
Position
1409763..1410476
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AA seq
237 aa
AA seq
DB search
MSLRAIYYDTETTGIKPEKDRVIEIAAYDPVQNRRFEKFVHPGFPIPPESTAIHHITDEM
VANAGSFADVGAEFVEFCAGEVVLIAHNNDNFDLHFLRHEFERNQLILPTHWKFLDSLKW
ARRYRSDLPRHTLQFLREIYGITANNAHRALDDVIVLERVFRSMVDDLEIQDVFDLLNRP
RAIQHMPFGKHQGQPLNKIPKNYISWLATTGAFDKPENQELKASFVKLGLLEMAESM
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaagagcgatttactatgatacagaaacgacaggcataaaacccgaaaaagat
cgggtgattgaaattgctgcctatgaccctgttcaaaatcgacggtttgagaaattcgtt
catcctggttttccgattcctccagaatccaccgctattcatcatatcactgatgaaatg
gttgcaaacgcaggttcttttgcagatgtcggggcagaatttgtcgaattttgtgccggt
gaagttgttttaatcgcgcataataatgacaattttgaccttcattttctacggcacgaa
tttgagaggaatcaacttattcttccaactcattggaagtttcttgattctttaaaatgg
gcacgacggtaccgatcagatctccctcggcatacattacagtttttaagagaaatttat
ggaataactgctaacaatgcgcacagggcattagatgacgtgattgttttagaaagagtt
tttcgctcaatggttgatgatttagaaattcaagatgtatttgatttattaaatcgccca
agagctatccaacatatgccttttggcaaacaccaagggcagcccttaaataaaattcca
aaaaattatatctcatggctagcaacgacaggggcttttgataaacctgaaaatcaagaa
ctgaaagcaagttttgtaaagcttggcttactagaaatggcagaatccatgtga
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