KEGG   Candidatus Protochlamydia amoebophila: PC_RS06025
Entry
PC_RS06025        CDS       T00172                                 
Name
(GenBank) unnamed protein product
  KO
K19223  peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
pcu  Candidatus Protochlamydia amoebophila
Brite
KEGG Orthology (KO) [BR:pcu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pcu01002]
    PC_RS06025
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pcu01011]
    PC_RS06025
Peptidases and inhibitors [BR:pcu01002]
 Cysteine peptidases
  Family C40
   PC_RS06025
Peptidoglycan biosynthesis and degradation proteins [BR:pcu01011]
 Peptidoglycan biosynthesis and degradation
  Endopeptidase
   PC_RS06025
SSDB
Motif
Pfam: LysM LysM3_LYK4_5 LysM2_CERK1_LYK3_4_5 LysM3_NFP HTH_19
Other DBs
NCBI-ProteinID: CAF23974
UniProt: Q6MBS5
LinkDB
Position
complement(1512220..1512954)
AA seq 244 aa
MTRKDTILIAVVINAGLLAILFATAIIYDTEKVLEQSEFNSSLAEAKEIPLTDPANHLVA
TGPVIVDEVDNVLKYYSQPSYSLKIDPSDSYNPESIVVQASPSEDDEPISEFSPNFKGNF
VEITVKKGDVLEKIARANGTTINAIKKANNLPNEKLSIGQVLKIPLNQVQGAIAAKSEIS
KKDLEQIENNQNSSEAVYYIVKSGDNPWKIAKQFNVKYEDILRLNQLDEEKARNLKIGDR
IRVK
NT seq 735 nt   +upstreamnt  +downstreamnt
atgacaagaaaggatacgatactgattgctgtcgttatcaatgctggattgttagcgatt
ttatttgcgacagctatcatttatgatactgaaaaagtgctggagcaaagcgaattcaat
tcttctttagcggaggctaaagaaattcctttaactgatccggctaatcatctagtcgcg
accggaccagttattgtggacgaagttgataatgttttaaagtattattctcaaccttct
tattcattaaaaattgatccttctgattcttataatcctgaatctatcgttgttcaggcg
agtccttctgaagacgatgagccaatatctgaattttcacctaattttaaaggtaatttt
gttgaaataaccgttaaaaaaggagatgtattagaaaagattgctcgtgctaatgggaca
acgattaatgcgattaagaaagcaaataaccttcccaacgaaaagttgtcaataggtcaa
gttttaaaaattcctttgaatcaagttcaaggggcaattgcagcaaaaagtgaaatatct
aaaaaggatttagagcaaatagaaaataatcaaaactcatccgaagctgtttattatatt
gttaagagcggagataatccttggaaaattgctaaacaatttaatgtgaaatatgaggat
attttaaggctaaatcaattagatgaagaaaaggctagaaatttgaagattggggatcgc
attcgcgttaagtag

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