Candidatus Protochlamydia amoebophila: PC_RS06040
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Entry
PC_RS06040 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Pathway
pcu00300
Lysine biosynthesis
pcu00550
Peptidoglycan biosynthesis
pcu01100
Metabolic pathways
pcu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PC_RS06040
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PC_RS06040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PC_RS06040
Enzymes [BR:
pcu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PC_RS06040
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
MucBP_2
Motif
Other DBs
NCBI-ProteinID:
CAF23977
UniProt:
Q6MBS2
LinkDB
All DBs
Position
complement(1515596..1516933)
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AA seq
445 aa
AA seq
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MRIMTLKQIAKILNSSLPEVEGVVKGFCVDSRLTKKNEVFVALRGEHVDGHAYLNEVKQK
GALAAIVDQNYQGPVFGMHLFRTENPLLALQMLAQKCLEKTSRVVAVTGSIGKTTTKEFI
KTLLEQRYVTAASQGNSNSQVGLPLTVLNHTTGTEDILVLEMGMTEPGQLSTLVNIAHPE
VSVLTTAALVHACRFETLKDIALTKAEIFSHSHTRLGVVDREIEAYETIAQIGECKKISF
STVSSRADYHLETVNEEVRLKTEGQSISLGKMCLPGKHNLHNLLAAIAVARYFELTWNEI
KQAIPFLKLPERRLQFVQKEGVYFLNDSYNASELSVKSALETLPNATGKGYKIAVLGSMM
ELGHFSDECHQRVGEFALNYVDKMYCLGAECLPIVEVWKKANRPVELFMERSELISTLKK
NLKPADVVLLKGSRSKELWKILEEL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagaataatgactttaaaacagattgctaaaatcttgaattcctctttgcctgaagta
gagggtgtagttaaaggattttgtgtagatagtcggctaacaaaaaaaaatgaggttttt
gtcgctttaaggggagagcatgtagatgggcacgcctatttgaatgaagtgaagcaaaaa
ggagccttagcggcaatcgtcgatcaaaattatcaagggcctgtatttgggatgcattta
tttcgaacagaaaatcctttactagctctccaaatgctagctcaaaaatgtcttgaaaaa
acgagccgtgttgtagctgtaacaggttcaatagggaaaacaaccacaaaagagtttatt
aaaacacttttagagcagagatatgtcactgctgcttcccagggaaatagcaattcacag
gtaggtcttcctttaactgtattaaatcatacgactgggacggaagatatcttagtttta
gaaatgggaatgacagaacctgggcagctgagtacattagtcaatattgctcatccagaa
gtgtctgtattgacaacagctgctttagtccatgcttgtcgctttgaaacattaaaagat
atcgctttaacaaaagcagaaatattctctcattcgcatactcgattaggtgtggttgat
cgagagatagaagcttatgaaacaattgctcaaataggagaatgcaaaaaaatatccttt
tcgacagtaagctctagggctgattatcatttagaaactgttaatgaagaagttagatta
aaaactgaaggacagagtatttctcttggtaaaatgtgtttgccaggtaaacacaatctt
cacaacttacttgctgcgattgctgttgcgaggtatttcgagctaacttggaatgaaatt
aaacaagctatcccttttcttaaattacccgagaggcgcctacaattcgttcaaaaagag
ggtgtttattttttaaatgattcttataatgcttcggaattatcggtcaaatctgcctta
gaaacgctgccaaatgcaacgggaaaaggttataaaattgctgttttaggtagtatgatg
gagcttggacatttttcagatgaatgtcaccaacgtgttggtgagtttgctttaaattat
gtggataaaatgtactgtcttggtgctgagtgtttacctattgttgaggtttggaaaaaa
gcaaatcgacctgttgaattatttatggaacgttctgagctaatttcaactttaaaaaaa
aacttaaaacccgccgatgttgttttattgaaaggatctagatccaaagagttgtggaaa
atattagaagaactgtaa
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