Candidatus Protochlamydia amoebophila: PC_RS06075
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Entry
PC_RS06075 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Pathway
pcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PC_RS06075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcu03019
]
PC_RS06075
03110 Chaperones and folding catalysts [BR:
pcu03110
]
PC_RS06075
03029 Mitochondrial biogenesis [BR:
pcu03029
]
PC_RS06075
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcu04147
]
PC_RS06075
Enzymes [BR:
pcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PC_RS06075
Messenger RNA biogenesis [BR:
pcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PC_RS06075
Chaperones and folding catalysts [BR:
pcu03110
]
Heat shock proteins
HSP60 / Chaperonin
PC_RS06075
Mitochondrial biogenesis [BR:
pcu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PC_RS06075
Exosome [BR:
pcu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PC_RS06075
Exosomal proteins of other body fluids (saliva and urine)
PC_RS06075
Exosomal proteins of breast cancer cells
PC_RS06075
Exosomal proteins of colorectal cancer cells
PC_RS06075
Exosomal proteins of bladder cancer cells
PC_RS06075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TetR_C_41
Motif
Other DBs
NCBI-ProteinID:
CAF23983
UniProt:
Q6MBR6
LinkDB
All DBs
Position
1522444..1524048
Genome browser
AA seq
534 aa
AA seq
DB search
MSIPKEIIFEEEAREFLLKGIKKLADVVAFTLGPKGRNVGLEKSWGAPTITNDGASIIRD
IQLEDKYENMGVAMAKEVVQKIKEKCGDGTTSGALLLRSLVEAGIKNISSGASPIGIKRG
MDKAVEVVVKAIEKAAIPVKTKQETRNVAVVSASGNQEIGELIAEAMEKVSNSGAITIEE
GKGTETSIEVVKGMKFDRGYVSPYLCTNLEKMIVEMDHAQILLVDKKISSIHELLPVLQA
TAASGRELLIIAEDIDGDALSTLVVNKLRGTLKVAAVKAPGFGDRRKAMLQDIATLTAAT
VVSEELGISLKEIPATALGSAEKVTVTKESTTIVGGTGAQEDIAARIKQIDAEINLAQSS
YDKEKLEERRAKLSGGVAVIRVGAATETEMKQKKQMFDDSLNSTKAALEEGIVPGGGVAL
LNASKTLGQLKLEGDEAVGAKIVLQACETPIKQIVQNTGFDGSVVLNEVLNSPANFGFNA
LTEKVEDLIAAGVIDPAKVIKNTLTYAASTAGIVLLSEALIADADDEEEENSTK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatacctaaagaaattatttttgaagaggaagcacgggaatttcttttaaaggga
atcaagaaattagccgatgttgttgccttcacccttggccctaaaggaagaaatgtaggt
cttgaaaaaagttggggagctcccacaatcacaaacgacggcgcaagcatcattcgagat
attcaactcgaagacaaatacgaaaatatgggcgttgcaatggcaaaagaagtcgtccaa
aaaattaaagaaaagtgtggagatggaacaacaagtggagctctacttttaagatcttta
gtggaagccggtataaaaaatatttcttctggagcaagtccaatcggaattaaaagaggg
atggataaagctgttgaagttgttgtaaaagcaattgaaaaggcagctattccagttaaa
acaaaacaagaaacaagaaacgttgctgttgtttccgcttccggtaatcaagaaattggc
gaattaattgcagaagcgatggaaaaagtgagtaattccggcgctattacaatcgaagaa
ggaaagggtaccgaaacaagtatagaagttgtcaaagggatgaaatttgatcgtggttat
gtcagtccttacctttgcacgaacctcgaaaaaatgattgttgaaatggatcatgctcaa
atcctcctcgttgataaaaaaatttctagtattcatgaattacttcctgtgcttcaagct
acggctgcatcaggacgcgaacttttaatcattgccgaagatattgacggagatgcattg
tcaacactagtcgtcaataaacttcgtggtactctaaaagtagctgctgttaaagcccca
gggtttggcgatcgtcgtaaagcaatgcttcaagatattgcaacgttaacagccgctacg
gttgtttctgaagaacttggcatttctttaaaagaaattccagcaacagctttaggatca
gcagaaaaagtaactgtcacgaaagaatcaacaacgattgttggtggaacaggagctcaa
gaagatatcgctgcaagaattaaacaaattgatgccgaaattaacttggcacaaagttct
tatgataaagaaaaactagaagagcgacgagctaaattgagtggtggcgttgctgttatt
cgagtaggtgcggcgacagagactgaaatgaagcagaaaaaacaaatgtttgatgatagc
ttaaattcaacaaaagctgctttagaagaaggaattgttccgggtggaggagttgcttta
ctaaacgcaagtaaaacgttgggccaactaaaactagaaggcgatgaagcggtaggagct
aaaattgttttgcaggcttgcgaaacacctattaaacaaattgtgcaaaataccggtttt
gatggaagtgtcgtcttaaatgaagtcctcaattctcctgccaatttcggatttaatgct
ttaactgaaaaagtcgaagacttaattgccgctggcgtgatagatcctgccaaagtcatt
aaaaatacgcttacctacgcagcatcaactgccggtattgtgcttctttctgaagcattg
atcgcagatgcggatgatgaagaagaagaaaactctactaaataa
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