Candidatus Protochlamydia amoebophila: PC_RS07525
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Entry
PC_RS07525 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcu03016
]
PC_RS07525
Enzymes [BR:
pcu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PC_RS07525
Transfer RNA biogenesis [BR:
pcu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PC_RS07525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
DUF7088
A1_Propeptide
Motif
Other DBs
NCBI-ProteinID:
CAF24295
UniProt:
Q6MAV4
LinkDB
All DBs
Position
1909819..1911387
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AA seq
522 aa
AA seq
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MAVSKNHFPISLVYKSSTTLKNIERLTYPFNRIFMAIQELKPTFDLTEIAKKTMREKNLL
TEFLLDVQKATEKTFDHGAISPATKRMTDFLWCSIDNDDSKYLDQLTYAEKLDDETYKIY
IAIAEVDHLVPQNSVIDRHAQYNTVSIYTPTKVFPMLPEKLSAGLTSLNEGVDRLAIVVE
VEVNDNGALGNFNIYSALVHNHAKLAYNSVSTWLEGNGPIPEKVANVTGMEAQLYLQDTI
TQLLKEFRNQKGALALETIKPKTIVEKEDAIDIKISKKNRARDLIENFMIVANTITALYL
KSKQLPSFRKIVRVPKKWDRIVEIARDLGETLPDQPDSKALDLFLIKQKLLDPVHFPDLS
LTIIKLLGNGEYIVEYYDDMPIGHFGLAHADYTHSTAPNRRYLDLITQRIIKAALENKEM
PYTLNELEKLAKHCTIQEVEADKVERKMRKSAAMMLLFSKFGEVFDAIITGAGTKGTWVH
IFNPSVDGKLVGGFENKDVGDLILVKLIHLDIENGHIDFTKV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtttcaaaaaatcattttcccatttcacttgtgtataaatcatcaaccacatta
aaaaacatagaaagattaacatatccattcaataggatttttatggcaattcaagagctc
aaaccgacttttgacttaacagaaatcgccaaaaaaacaatgcgcgaaaaaaatcttctg
acggaatttttactggatgtccaaaaagcgacagaaaaaactttcgaccatggtgccatt
tcccccgctacaaaaagaatgacagattttctttggtgttcaattgataacgatgattca
aagtatctagatcagttaacatatgcggaaaaattggatgatgaaacgtataaaatctat
attgctattgctgaagtcgatcaccttgttcctcaaaattctgtcattgatagacatgcc
caatataatactgtctcgatttatactcctacaaaagtttttccaatgcttcctgagaaa
ctatcggcaggtttaacttctttaaatgaaggtgtagatcgcttagcgatagtggttgaa
gttgaagttaatgataatggagctttaggaaacttcaacatttattcagctcttgtacac
aatcatgctaagctcgcttataatagtgtatcgacatggttagaaggaaatgggcctatc
ccagaaaaagttgccaatgtaacaggaatggaagcacaattgtatcttcaagatactatt
actcaacttttaaaagagtttcgaaatcaaaaaggagcattagccttagagacgattaaa
ccaaaaactatcgttgaaaaggaagatgctattgatattaaaatttctaaaaaaaatcga
gcccgggatttaattgaaaattttatgattgtagccaacacaatcacagctctttattta
aaatctaaacaactcccttcatttcgcaaaatagtcagggtaccaaaaaagtgggatcgt
attgtagaaattgcacgcgaccttggtgaaacattgccagatcaaccagactccaaagct
ttagatttattcttaattaaacaaaaattattagatcctgtccatttccctgatttatcg
ctgacaattattaagcttcttggaaatggagaatatatcgttgaatattatgatgatatg
ccgattggtcattttggtttagctcatgctgattatacacattctacagctcctaatcgt
cgatatctcgatttaattacacaaagaatcattaaagctgctttggaaaataaagaaatg
ccttacactttaaatgaacttgaaaaattggctaaacattgcacaattcaagaagtcgaa
gctgataaagtagagcgtaaaatgagaaaatcagcagccatgatgcttttattttctaaa
tttggtgaagtttttgatgcgatcatcacaggagctggaactaaaggaacttgggtacac
atttttaatccctctgttgacgggaaattagttggtggatttgaaaataaggatgtaggc
gatttaattttagttaagcttatccatttagatattgaaaatgggcatattgattttaca
aaggtataa
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