Candidatus Protochlamydia amoebophila: PC_RS08795
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Entry
PC_RS08795 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Pathway
pcu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PC_RS08795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcu03000
]
PC_RS08795
03400 DNA repair and recombination proteins [BR:
pcu03400
]
PC_RS08795
Enzymes [BR:
pcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PC_RS08795
Transcription factors [BR:
pcu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PC_RS08795
DNA repair and recombination proteins [BR:
pcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PC_RS08795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CAF24558
UniProt:
Q6MA41
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All DBs
Position
complement(2216198..2217628)
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AA seq
476 aa
AA seq
DB search
MYFKAYLSRDARFDGIFYVGVLSTGIYCRCICPARRPKESNCRFFKSTGEAEKEFFRPCL
RCRPELAPGQSPVDDAHRIANLLISSMQEGLFDELGLEDIALKFNLSSRQIRRVIQKEFG
VSPIQLLLTRRLLLAKQLLTDTDLSVIDIAFASGFSSLRRFNDAFKKHYRMPPNQLKKEG
QRKKTFFPSAYITLQLNYRPPYDWIGFLNFLSIRSLKGIELVKNNCYLRTVQIREYKGWI
HVSHVEDKHCLRVKIASSLVPVLAILLERIRNFFDLNARPDKISVQLEQDPFLAEEVAKN
PGLRVPGTFDGFELAFRAILGQQITVKAATTLASRFVKAFGEEFKTPFAELHYLCPSSQR
ISSLKWEEIATIGIIRARAQTIIELAKQMSSNTLKLEAGVNLRLTIKQLTSIAGIGQWTA
HYIALRALQWPDAFPKEDVALRKKLGKVTAKQAEKLSQVWRPWRSYATLYLWQKKD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcaaagcttatctttcccgcgatgcacgttttgatgggattttttatgtggga
gtcctttctactggaatttactgtcggtgtatttgtcctgcgagaagaccaaaagaatca
aattgtcgctttttcaaaagtacaggggaagctgaaaaagaattttttcgaccttgttta
cgctgtcgcccagagctagcaccgggtcagtccccagtggatgatgctcatcgcattgcc
aatcttttgatttcttctatgcaagaagggttgttcgatgaattaggacttgaagatatt
gccttaaaattcaatttaagttctcgtcaaattcggcgtgtcattcagaaagaatttggt
gtctcacctattcaattattattaactcgccggttacttttagcaaagcagttattgacg
gataccgatttgagtgtgatagatattgcttttgctagtggattttctagcctgcgtcgt
ttcaatgatgcttttaaaaagcattatcgcatgcctcccaaccaattaaaaaaagaaggt
caacgaaagaaaactttttttccttccgcatacattacgctgcaattgaattatcgtccc
ccctatgattggataggttttttaaattttttatctattcgttctttaaaggggatagag
ctagttaaaaataattgttatttacgtactgtacagattagagagtataaaggctggatt
cacgtttctcatgtagaggataaacattgcctaagagtcaaaattgcttcttctttagtt
cctgtgctagcgatattattagagcgaattcgcaatttttttgatttaaatgctaggcct
gataaaatttctgtccaacttgagcaagatccctttttggcagaagaagtggcaaaaaat
ccaggtttgagagttcctggaacatttgacggatttgagctagcatttagagctatttta
gggcaacaaattactgtcaaagcagccactacactcgctagtcgatttgtaaaagcattt
ggtgaggaatttaaaactccctttgcagagttgcattatttatgtccaagttctcaacgc
atttcttctttaaagtgggaagaaattgcgactattggaattattcgtgcaagagctcaa
acaataattgaattagccaaacaaatgtcatcaaatactcttaaattagaagcaggcgtt
aatctgagattgacaattaaacaattaacatcgatagcagggattggccaatggacggct
cattatattgctttacgagctctccaatggcctgatgcgtttccaaaagaagatgtggca
ttgcgcaaaaaacttggcaaagtaacggcgaagcaagcggagaaattatcacaagtgtgg
cgtccgtggcgcagctatgcaacgttgtacctgtggcaaaaaaaggactaa
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