Psilocybe cubensis (magic mushroom): JR316_0000234
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Entry
JR316_0000234 CDS
T08288
Name
(RefSeq) Serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JR316_0000234
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcub01009
]
JR316_0000234
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcub03041
]
JR316_0000234
Protein phosphatases and associated proteins [BR:
pcub01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
JR316_0000234
Spliceosome [BR:
pcub03041
]
Common components
Common spliceosomal components
SR proteins
JR316_0000234
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
71966555
NCBI-ProteinID:
XP_047753795
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All DBs
Position
1:856103..857139
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AA seq
226 aa
AA seq
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MNTDDQNWGSNNNGNNGSGRSPARDGGREGRNGDAPRRSSRSRSPGATRGGDDRGRNESS
SNPGNNLHVSGLSHKVDTRDLEAAFAKIGRVKKASVMYDPHTRESRGFGFVTMESAEEAE
AAVAALNATELMGKIINVEKARRGRARTPTPGRYYGPPKRSDFERPYDPRPYDSRYSRDY
DDRRGGRGGGRDDYRGGRDYDRHRYDDRDRDRDRGYGRDRYDDRRH
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggacgaccagaactggggatccaacaacaacggcaacaacggctccggacgc
tcgcccgcacgggacggcggccgtgaaggaagaaatggcgacgccccgcgccgctcgagc
aggagcaggagccccggagccacccgtggcggggatgacagaggtcgtaatgaaagcagt
tcgaaccctggaaacaacttgcacgtctctgggttgagccacaaagtggacacccgggac
ttggaagcggcatttgctaaaattggcagggtcaagaaggcttcggtgatgtatgatcca
cacacacgggagtcgcgtgggtttggatttgtgacgatggagagtgcagaggaagccgag
gctgctgtggctgctcttaacgctactgagctcatgggcaagattatcaatgtcgaaaag
gcacgccgtggacgagccaggacacccactcctggaaggtactatggccctcccaagcgc
agtgactttgaacgtccctacgaccccagaccgtacgacagccgatactcccgcgactac
gatgatcgtcgcggcggacgcggagggggccgcgacgactaccgtggtggaagggactac
gataggcatagatacgatgaccgtgatcgtgaccgcgaccgtggctacggccgagacagg
tacgacgataggagacactaa
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