KEGG   Psilocybe cubensis (magic mushroom): JR316_0000602
Entry
JR316_0000602     CDS       T08288                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
pcub  Psilocybe cubensis (magic mushroom)
Pathway
pcub03020  RNA polymerase
pcub03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    JR316_0000602
  09124 Replication and repair
   03420 Nucleotide excision repair
    JR316_0000602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcub03021]
    JR316_0000602
   03400 DNA repair and recombination proteins [BR:pcub03400]
    JR316_0000602
Transcription machinery [BR:pcub03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     JR316_0000602
  RNA polymerase III system
   RNA polymerase III
     JR316_0000602
  RNA polymerase I system
   RNA polymerase I
     JR316_0000602
DNA repair and recombination proteins [BR:pcub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      JR316_0000602
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 71966923
NCBI-ProteinID: XP_047754162
LinkDB
Position
1:complement(1929338..1930013)
AA seq 168 aa
MSDDGYDGGRAGDDYDYEAGPGYNDGAFDEGYDLLANEQDGENAEVGEDGMPLGEDAAHG
GAHGADGDQEMANGDDTNGGAGISGERQPNKIRITTPYLTKYERARILGTRALQISMNAP
VLVPLDGETDALQIAIKELSQRKIPLIIRRYLPDGSFEDWSVSELITD
NT seq 507 nt   +upstreamnt  +downstreamnt
atgtctgatgatggttacgatggaggacgtgccggtgatgactatgactacgaagcaggg
ccagggtataacgatggagcctttgatgaaggctatgaccttctcgcgaatgagcaagac
ggtgaaaatgcggaggtaggcgaagatggtatgcctttgggcgaagatgcagcccatggc
ggtgcccatggggccgacggtgaccaagaaatggccaatggagatgacacaaatggtggt
gctggaatctctggagagcgtcaacccaacaaaattcgtataacgacgccatatctaaca
aaatacgaacgagcacggatattaggcacaagagcgctgcaaatcagtatgaacgctcct
gttcttgtcccactagatggcgaaacagatgctctgcaaattgccattaaagaactttcc
caacgcaaaatcccactcattatccgacgataccttcctgatggcagctttgaggattgg
agtgtttctgaacttattactgattag

DBGET integrated database retrieval system