KEGG   Psilocybe cubensis (magic mushroom): JR316_0000837
Entry
JR316_0000837     CDS       T08288                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit rpabc3
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
pcub  Psilocybe cubensis (magic mushroom)
Pathway
pcub03020  RNA polymerase
pcub03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    JR316_0000837
  09124 Replication and repair
   03420 Nucleotide excision repair
    JR316_0000837
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcub03021]
    JR316_0000837
   03400 DNA repair and recombination proteins [BR:pcub03400]
    JR316_0000837
Transcription machinery [BR:pcub03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     JR316_0000837
  RNA polymerase III system
   RNA polymerase III
     JR316_0000837
  RNA polymerase I system
   RNA polymerase I
     JR316_0000837
DNA repair and recombination proteins [BR:pcub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      JR316_0000837
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 71967158
NCBI-ProteinID: XP_047754397
LinkDB
Position
1:complement(2556140..2556786)
AA seq 157 aa
MTAAASSIVFDDIFSINAIDKEGKKFDRVSRLYAHSKNYDMDLTLDYNVELFPLQKDQNF
ALALASSLAKGGAPKTEGAGDDDSERDVWRPDGKGNRGLEDEYDYVMYGKIYKFDSDSGE
IVTAYISFGGLLMSLTGSSRHMTSIVLGDPIYLLMRK
NT seq 474 nt   +upstreamnt  +downstreamnt
atgacggctgcggcatcaagcatcgtgttcgacgacatattcagtattaatgcaattgat
aaagaagggaaaaaatttgacagagtctctaggttgtatgcgcactccaaaaactatgat
atggacctgacgttagattacaacgtcgagttgtttcccttgcaaaaagatcaaaatttc
gcattagcattggcatcatctcttgccaaaggaggggcacctaagaccgaaggcgcgggt
gacgacgattctgaacgagatgtgtggagaccagatggcaagggaaacagaggtctggaa
gacgagtacgactatgtaatgtatggcaagatctacaaattcgactctgattctggagaa
attgtgactgcatatatatcttttggaggattgctcatgtctctgactggttcgtctcgg
catatgaccagcattgtacttggagaccccatctatcttctcatgcggaaataa

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