Psilocybe cubensis (magic mushroom): JR316_0000865
Help
Entry
JR316_0000865 CDS
T08288
Name
(RefSeq) putative helicase C15C4.05
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pcub03012
]
JR316_0000865
Enzymes [BR:
pcub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JR316_0000865
Translation factors [BR:
pcub03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
JR316_0000865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
UBA_DHX29
HA2_N
DEAD
nSTAND3
ABC_tran
AAA_22
NPHP3_N
DSRM_DHX29
UBA_7
Motif
Other DBs
NCBI-GeneID:
71967186
NCBI-ProteinID:
XP_047754425
LinkDB
All DBs
Position
1:complement(2623141..2628781)
Genome browser
AA seq
1449 aa
AA seq
DB search
MAKKKKTQLKPVARGFTTTSLPKKVVSGDIAEVERPSIEASVNTFGEDDDGKITQRIEPV
EKETSSIISSEEVDLQNLVDRHQDKTEREVSRTLKSIEVDRRYSQTLPRLDIDPLLRDKL
LDISLNSEISEGQKTVEDSEEKTLSRLSISYGVLRRLGFTEERVDECLRSISGVELDEAF
DWLYLHCSEEELPFESQISATFKLPSGVTFRKNVTPPPTPRIEQVPLYHSKPVVNQSPSS
TGGVNISNSNSAENPDDLVVMDKPKTPPTDEYTTSSEGTGSDDEFDNDPTLAYVRLKLKL
DEISSNPQSQLRQEQLKQLRDRLNKVAQDYLFDEKDAFLRYKEERNKIDQQLLNERLRLS
GTDLSEPSKSRDKKPHTTKPSKGSNIVDDGNDTDDSIGMLGILEDPNATEINIKGVTFCL
RDMTVPKHWSGPMPKTMLRDLVTKMDRYAAISYTTLSDHSRARRASVSISWQNKKRDEWI
MDDVACSEDSQAEQYIAAVALHSLTHPLAEGFIPSIPANASSSTSFRLLPAVYRDLWDEM
EISRKARDDAINRQIWSKLLSIMEDKIQRDSKVCQHLQKQQKTSSGKPLSGLIRNPLDNK
DHFDSLSLAFQARQQTTAYQEMLSRRNDLPIARFRDRIVEILAYSQVLVLSGETGCGKST
QVPSFILEDHMSKGKPCKIYCTEPRRISAISLAQRVSYELCDPPNSVGTNNSLVGYSIRL
ESNICRNTRLAFVTNGIALRMLEGGSGQGGSGTAFDEITVHERTIESDFLLIVLKSLLIE
RPDLKVVLMSATLDAEKISSYFGNCEILQVPGRTFPVDVKYLEDAIECTKWSISDNSPYA
RRLHDKYYKGKNRSEWTEDAPTIDDEDDELSDSKNNTVKLEKRYSTETVATLNTIDERLI
PYDLIIRLLEVICFENYVYRPFSPAILIFMPGLGEIRRLNDTLVEHAFFGSSEFRIYPLH
STLSSESQGAVFDVPPPGIRKIVIATNIAETGITIPDITCVIDTGKHREMRFDEKRQISR
LVETFISRSNAAQRRGRAGRVQSGLCFHLFTRIRHETQMAESPLPEMMRLSLSDLALRIK
IMKVKLGSSIEDVLARALDPPISINVQRAVSMLIEVRALTPSEEITPMGRLLSKLPTDVH
LGKFLLISTLFRCLDPALTIAATLNSKSPFVAPFGLEHDADRARNSFRIENSDFLTIHNA
FSSWRTSCADPNFARKFCRKYFLSHQNLLQIEDLRQQFLGYLIDSGFIQVDKSIIRELSR
ARFSRNRTRFVLIPSELDANSDKPTLVHAALAAGLYPKILSVDQKNGQLRTITNNQHAMF
HPSSVNFGRNPIDFGVNHLTYFTLMHSKKLYAWETAPVDDLSMLLLCGEADFKLAADTIY
IDRKIKVCTSPKTSIALKILRERLTSLLARQYEGKVLTDSQSKWMELGLLALSRIKLVSE
NDGAAIGIR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaagaagaagactcaactcaagcccgttgctcgaggatttaccaccacctcg
cttccaaagaaagttgtttcaggggatattgctgaagtcgaaaggccttcaatcgaggct
tccgttaacacgtttggtgaagatgacgatggaaaaattacgcaacgtattgaaccagtg
gagaaggagacatcaagtataatttcatctgaggaagtggatttgcaaaaccttgttgat
cgacaccaagataaaacggagagagaggtatctaggactttgaagtctatcgaagtggat
cgacgatattcacaaacgctacctcgactggacatagatcccctattgcgggacaaattg
ttggacatctctttgaatagtgaaatctccgaaggtcaaaaaacagtcgaagactcagaa
gagaaaacactttctagacttagtatcagctatggggtactaagaagattaggttttaca
gaagagcgcgttgatgaatgtttaagaagtattagcggcgttgaactagacgaagcattc
gactggctttacctgcattgctcagaagaagagctccctttcgaatctcaaatatctgct
acgttcaagctgcctagtggtgtgactttccgaaagaatgttacacctccacctacacct
cgaattgaacaagtacctctatatcactccaaaccagttgtcaatcaaagtccatcgagc
acaggcggtgtaaatatttcgaattcaaatagtgccgaaaaccctgacgacttagttgtg
atggacaaacctaaaactccccccacggatgaatacacgacgagttctgaaggaacaggg
tctgacgacgagttcgacaatgatcctaccttggcctatgttcgcctcaaactcaagctt
gatgaaatatcctcgaacccgcaatcgcagctcagacaggaacagctgaaacaattacga
gacaggttgaataaagttgctcaagattacctcttcgacgaaaaggatgcatttctacgg
tacaaggaagagcgcaacaaaatcgatcagcagctattaaatgaacggcttcgtctttcg
ggcacagatctctcagagccatcgaaatcgcgagacaaaaaaccacataccacgaagccc
agcaaaggcagtaacattgtggacgacggcaatgatactgatgattcgatcggaatgtta
gggattcttgaggacccaaatgccactgaaattaatatcaaaggtgttactttctgtctg
cgggatatgactgtgcctaaacattggtcgggaccaatgcctaaaactatgcttcgggat
ttggtgaccaaaatggaccgatatgctgctatatcttatacaaccctttcagaccattcg
cgagcgagacgagcaagtgtcagtatctcatggcaaaacaaaaaaagggacgaatggatt
atggatgacgtagcatgctctgaggactctcaggcagagcaatatatagcagcagtcgcc
cttcattcattaacgcatcctttggcagaaggattcattccctccattcctgcaaatgca
agtagttctacttcattcagattactgccggctgtgtatcgagatctctgggacgaaatg
gaaatatcgaggaaagccagagatgatgctatcaataggcagatatggtccaaactgctt
tctatcatggaggataaaattcaaagagattcaaaggtttgccaacatttacaaaagcaa
caaaaaacatcatctggaaagcctttgtcgggattaattcgtaaccctcttgacaataag
gatcactttgattccctttcccttgcgtttcaagctcggcagcaaactactgcttaccaa
gaaatgctctctcgcaggaatgacctgccaattgcacgatttcgtgatcgtatagttgaa
atccttgcatattcacaagttcttgttctaagtggcgaaactggatgtgggaaatcaact
caggttccttcattcattctagaggatcatatgtcaaagggaaaaccttgcaagatatat
tgcaccgaacctaggagaatttcagccatatcattggcgcaacgcgtatcatacgaactc
tgcgatcctccgaattctgttgggacgaataattctcttgtcggctattcgataagattg
gagagcaatatttgtcgaaatacccggttagcttttgttaccaatggtatcgctttaaga
atgcttgaaggcggaagcggacaaggcggaagcgggactgcattcgatgaaatcacggtc
catgaacgcactattgaatccgattttttattgattgtcctaaagtcattgctaatcgag
aggcctgacctgaaggttgtcttgatgtctgcaacgctggatgcggaaaagatatcaagt
tacttcgggaattgcgaaattcttcaggttcctgggcgtaccttccctgttgatgtgaaa
tatcttgaagacgcaattgaatgcacaaagtggtcaatctctgacaattctccttatgca
agacgactccatgacaaatattataaaggaaagaataggtcggaatggacagaggatgca
cccactatagatgatgaagatgacgaactgagcgacagcaaaaacaatacggtcaaacta
gaaaaacgctattccactgaaacagtcgcgacactaaatactatcgatgaacgattgatt
ccatatgaccttattattaggctcttggaggtcatatgttttgaaaattatgtgtaccgg
cccttctcaccagctattttgattttcatgccgggtttgggtgaaatacgtcggctgaac
gataccctcgtcgaacacgccttctttggttcaagtgaatttaggatttatcctcttcat
tcaacactatcaagcgaatctcaaggagcagtgtttgacgttccacctccaggaattcgc
aaaattgtcattgcgaccaacattgctgaaacaggaatcacaataccggacattacatgt
gtgattgatacgggaaagcatcgtgaaatgagatttgatgaaaagcgacagatcagtcgg
ctagttgagacttttatttctcgaagcaacgctgcgcaaagacgtggtcgtgcaggtcgc
gttcaaagtggactttgctttcatctgttcacacgaattcggcatgaaacacagatggcc
gaaagtcctctccctgaaatgatgagacttagtttatcagatcttgctctccgaatcaaa
atcatgaaagtcaagcttggatcttcaatagaggatgtcctcgctcgtgcccttgatcca
cctatttctatcaatgtccagcgagcagtctcgatgctcatcgaggtccgagccttgaca
ccttctgaggagatcacccctatggggaggttgttgagcaaattaccgacagacgtccat
ctcggaaaatttttgttaatttcgacgttgtttcgttgtcttgatcccgctcttaccatc
gccgctacactgaattctaaatcgccctttgtcgcccctttcggtttagagcatgatgca
gatagagccagaaattcatttcgcattgaaaactcggattttttgactatccataacgcc
ttttccagttggcgcacatcatgtgcagatcctaattttgcaaggaagttttgtcgcaaa
tatttcttgagccaccagaatctactacagattgaagacctccgccaacaatttttaggg
tacctcattgactccggatttattcaggttgataagtctattattcgcgaattaagtcgc
gcccggttttcacgcaatcgtacgcgctttgttctaattccatcagaactggatgcaaac
tcggacaagcctacactggttcatgctgctctagcagcaggactttatcccaaaatttta
tcagtggatcagaagaatgggcaactgcgtaccatcaccaacaatcaacacgctatgttc
catccctcgtcggttaattttggcaggaacccaatcgattttggagttaaccacctgaca
tatttcacgctgatgcattctaagaaactgtatgcttgggaaacagcgcctgtcgacgac
ctttccatgcttttgctgtgcggagaagcagacttcaagcttgctgctgacaccatctat
attgatcgcaagatcaaggtatgcacatctccgaaaaccagcattgctctcaaaattctt
cgagagagactgacgagtctactcgcacgacaatacgaaggaaaggtacttacagactca
cagtcgaaatggatggagctcggattgctagcactcagcaggataaaacttgtatcagaa
aatgacggagcggccataggaattagatag
DBGET
integrated database retrieval system
