Psilocybe cubensis (magic mushroom): JR316_0000961
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Entry
JR316_0000961 CDS
T08288
Name
(RefSeq) putative U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JR316_0000961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcub03019
]
JR316_0000961
Messenger RNA biogenesis [BR:
pcub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
JR316_0000961
mRNA degradation factors
5'-3' decay
Lsm complex
JR316_0000961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
71967282
NCBI-ProteinID:
XP_047754521
LinkDB
All DBs
Position
1:complement(<2862766..>2863233)
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AA seq
116 aa
AA seq
DB search
MLVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFAESWHGLFLIRGENVVLLGEI
DLDKEEEVPLKQVEYNLLAAFHKQDAESKKEREEIKSQILYEQKGFCKEGGEGDGY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtaatcctacgcgacggcaggaagcttcatggtgtcctgcgttcctatgatcag
tttgccaatcttgtactcgaggacaccgtcgaacgtatatatcatggaaacgcatttgca
gagagctggcatggtctcttccttatccgaggagagaatgttgtgctgctcggcgaaatt
gatctggataaagaagaagaagtccctctcaagcaggttgaatataatctgctggcggca
tttcacaaacaagacgccgagtccaaaaaggaacgcgaagagatcaaatcccagatcttg
tacgagcagaaaggattctgcaaagaagggggcgaaggcgacggatactga
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