Psilocybe cubensis (magic mushroom): JR316_0001034
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Entry
JR316_0001034 CDS
T08288
Name
(RefSeq) RNA-binding protein rsd1
KO
K13091
RNA-binding protein 23/39
Organism
pcub
Psilocybe cubensis (magic mushroom)
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcub03041
]
JR316_0001034
Spliceosome [BR:
pcub03041
]
Common components
Common spliceosomal components
General mRNP proteins
JR316_0001034
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_3
RRM_occluded
RRM_RdRP1_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
71967355
NCBI-ProteinID:
XP_047754593
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All DBs
Position
1:complement(<3053102..>3055439)
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AA seq
590 aa
AA seq
DB search
MSSATGKMEIDKSPNNHSSRNLSTDTLRTRRSHRSVSRDHDHDKKDRRREPDERRKRSRS
RDRGSERGYRDRSRDGYRDRDRDRRRDREDRGHRSSRHDGPDVRHGRRDRDRGDRERGDR
DRERDRDRDREDRDRRRKRTEDYDGPERDHDDRVKRKRSETLDDIPPPPPNLPPPPPPRD
SPRSARSGDRRRGDKNDYDDPRSARRRSRPLDDDDDELGMRSPPPPGVRRGSPSYPSYDN
QMDDPYNPDEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDRLSR
RSKGIGYVEFRSIDLVEKALALSGTVVMGLPIMVQLTESERNKLHPGDGSLNLPPGVTSS
HGSMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARM
ALEQMEGFELAGRTLRVNTVHEKGTAKYTQQDSLDEAGGGNLNAASRQALMQKLARTESA
PSLPEPAPRVNIPQSMQSRSVLLKNMFDPEEETERDWDKDLAEDVKGECENKYGSVTAIK
VEKETQGEIYVKFETIESAKKAIQGLNGRWFGGRQVSAAFISDAIMQAHQ
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggctactggcaaaatggaaattgataaatctccaaacaatcattcttctcgg
aatttgtctactgatactctccgcactaggcgctcacaccgatctgtgtcaagagaccac
gaccatgacaagaaagatagacgaagggagcctgacgaaagaagaaaaagaagtcgcagt
cgtgacagaggaagtgaaagagggtaccgggaccgttcgcgcgacggatatcgggatcgt
gatagggaccgccgacgtgacagagaggatagaggacatcgtagcagcaggcatgacggg
cctgatgttagacacggtcgacgcgatagagatagaggggatagggaacgaggggacagg
gacagagagagagacagggatagggatagagaggaccgtgatcgcaggcgaaagcgtact
gaagactatgatggaccagaacgcgatcacgacgatagggttaagagaaagaggtccgaa
acactagacgatattccaccaccccctccaaacttgccacccccaccccctccccgggac
agtcctcgttcagctcgttctggagaccgtagaagaggtgacaaaaatgattatgatgat
ccaagaagtgcaagaagacgtagtcgtcccctcgatgatgacgacgacgaacttggcatg
aggagccctccgccgccgggtgttagacggggctctccatcatacccttcatacgataat
caaatggatgacccgtataatcctgatgaaccaaaagaagacgattctgaagcacgatca
gtttttgtttcgcaacttgctgcgcgcttgaccgctcgagacctaggctatttcttcgaa
gataagctcggggaaggaaccgtaatggattcaaggattgtcactgacaggctatctcgt
cgatctaaagggattggttatgttgagttccggtctattgatctcgtagaaaaggctctt
gctctttctggcacagtagtcatgggtctacccatcatggtacaactaactgaatctgaa
agaaacaaattacatccgggtgacggaagccttaatctccctccaggggtcacatcgtcc
catggatctatgcagttatatgtcggttctttgcatttcaaccttaccgaatccgatatc
aagcaggtgtttgaaccttttggtgaacttgaatttgtcgatttgcatagggacccgatg
acagggcgcagtaagggctatgcctttgttcaatacaagcgctctgaggatgctagaatg
gctcttgaacaaatggaaggatttgagcttgctggtcgtactcttcgcgtcaacactgtt
catgaaaagggaaccgctaagtacactcaacaggattccttagatgaagcgggcggtggt
aacttgaacgctgcttcacgacaagcactgatgcagaaacttgctaggactgaatctgct
ccttctcttccagagcctgcaccacgcgtcaatattcctcaatccatgcaatctcgttcc
gtattgttgaagaatatgtttgatccagaggaggaaacggaacgcgactgggacaaagat
ttggctgaagatgtcaaaggagaatgcgaaaacaagtatggctcagtcacagcaatcaag
gtcgaaaaagaaacccagggcgaaatctacgtcaaatttgaaactattgaatcggctaag
aaagctattcaaggcctaaacggtcgctggtttggtggtcgacaagtttccgcggcgttc
atatctgacgccattatgcaagcccatcagtag
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