Psilocybe cubensis (magic mushroom): JR316_0001075
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Entry
JR316_0001075 CDS
T08288
Name
(RefSeq) Transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JR316_0001075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcub03021
]
JR316_0001075
03036 Chromosome and associated proteins [BR:
pcub03036
]
JR316_0001075
Transcription machinery [BR:
pcub03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
JR316_0001075
Coactivators
SAGA/TFTC/STAGA complex
JR316_0001075
Chromosome and associated proteins [BR:
pcub03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
JR316_0001075
STAGA complex
JR316_0001075
TFTC complex
JR316_0001075
SAGA complex
JR316_0001075
SLIK complex
JR316_0001075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_RFWD3
LisH
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD_LRWD1
eIF2A
Beta-prop_VPS8
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
71967396
NCBI-ProteinID:
XP_047754634
LinkDB
All DBs
Position
1:complement(3141275..3144088)
Genome browser
AA seq
786 aa
AA seq
DB search
MSVATPTGSSQSPSAPSPSNPEAASGVPATDRLIVEYLKARGHPSAAKALLDEIEAASPN
ESGKQGETISAEDFVKLLSVFAQKQSKPGENALKDSANVIQELTSLGSSVNIQNLIASIG
TVGAEELLSLDPTDKQEGFRELEAWVDGSLDMYRPEFRPILFPIFCHFYLDLIQHGFKDA
AIRFFQKFSSSLAPSHSATLHHLSTLLLPAHVQSDDLAQRFRNEKYAIRMSRSGFGLLVG
WLTEGVGGEALGAGDGFTGEKGKRGRAAVMRVVNNHLRFDVTSSNPISVSPYAWEESTGL
LSSLIPQASGSKTNLTNPQAFNASKGALKLGQAPIPEDLRTEAERVLREQAMMDRELTSQ
YDMSLSRPIAMPPGVTAPTDADLLPHPPSFKTIDIEREVSAVRDARKRIRLEPSVLANID
PNSPQASALRARALPSICAYTLHDVAEGSPCCTFSPDTSLMAAGFAESYIRLWSLKGEKL
KGLRSDFSASTVKDASSLSKIKEKKGSTTRKLIGHSGPVYSVAFDPLSGSAAPPKYLLSA
SADTTTRLWSMDTMTNVVAFRGHENPIWDVKWSPMGIYFATASRDKTARLWSTERTSCLR
VYAGHLSDVDCVQFHPNSLYLATGSSDWTARLWDVQRGSCLRVFIGHQGAVSSLALSPDG
KYLATAGEDLAINLWDIGSGKRIKKMTGHTSSIYSLAFSAESSLLVSGGADWTVRSWDVK
GAGGPRTKPQKNGATNGSRSYGEEESTETSDLLATFPTKRTPITNVQFTSRNLCLVGGVY
LSPDSR
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgcgactcctacagggtcgtcgcaatctccatctgctccctctcccagtaat
ccggaggcagcttcaggtgtacctgcgacagaccgtctcattgtcgaatacctaaaggca
cgcggtcatccatctgccgcgaaggctcttctcgatgaaatcgaagcagcctctcccaac
gaaagcgggaaacaaggagaaactatatctgcagaagactttgttaaattgctttcggtt
tttgcgcagaagcagtcgaaacctggagagaatgccctaaaggactccgccaatgttata
caggagctcacatctttgggtagttctgtcaatatccaaaatttgattgcaagtattggc
acggttggcgcggaagaacttctttcacttgatcccacggacaagcaggagggctttcgg
gaacttgaagcatgggttgatggttctttggacatgtatcgacctgaatttcgtccaata
ctattccccatattctgtcacttttaccttgatttgattcagcatgggtttaaagacgct
gcaattcgattcttccaaaagttttcttcttccttggcaccatcacatagcgcaactttg
catcatttatcaactctactattacctgcccacgtacagagcgatgatctagcgcaacga
tttcgcaacgagaaatatgctattcgaatgagccgttctggatttggactattagttgga
tggctaacagagggtgtgggtggagaagccttaggggctggtgacggtttcacaggtgaa
aagggaaagcgcggtcgggcagcggtcatgcgcgtcgtaaataatcaccttcgctttgat
gtcacgtcatccaacccaatatccgtgtctccttacgcatgggaagaatcaacgggcctt
ctttcatcgcttattcctcaggccagtggaagcaaaacaaatctgacaaatccacaagca
ttcaatgcaagtaaaggagcactcaaacttggtcaagcacctattcctgaagatcttcgg
actgaagcggagcgcgttcttcgagagcaagctatgatggatcgtgaattgacctcgcag
tatgatatgtcactttcgcgacccatcgcaatgcctccaggggtcaccgcccctactgac
gcagatctattgcctcatcctccctcattcaaaaccattgatatcgaacgcgaggtcagc
gctgtacgggatgcccgaaaacgaatacgactagaaccctcggtattggcaaacatagat
cccaattctcctcaagcaagtgcattacgtgctcgtgccttgcccagtatatgcgcttat
acacttcatgacgtagcggaagggtcaccgtgttgcactttctcaccagacacttctctg
atggctgctggttttgctgaaagctatattcgtctttggagccttaaaggggaaaagctg
aagggattgcgaagtgacttctcagcaagcacggtcaaagacgcctcatccctgagtaaa
attaaggaaaagaagggcagcactacaagaaagctaattggtcacagtggacccgtttac
tctgtcgccttcgacccattaagcggctcagctgcgcctccaaaatatcttctatcggcc
tctgcagatactacgacgcgactgtggtcgatggacacaatgacaaatgttgtcgctttc
agaggtcatgaaaatcctatttgggacgtaaagtggagcccgatgggtatatattttgca
acagccagcagagacaaaacagcccgactctggtccaccgaacgcacatcatgtttgcgc
gtgtatgcggggcatctgagcgacgttgattgtgtgcaattccatcccaattcgctctac
ctggcgactggatcaagtgattggacagcgcgtctgtgggacgtgcaacgtggctcttgt
ttgcgggttttcattggacaccagggagctgtatcatctctcgctctcagtccagacggc
aaatatttagctacagctggcgaagaccttgccatcaatctatgggacataggttcagga
aagcgtatcaagaagatgacaggacatacttcatcaatctactccctcgcattcagcgcc
gaatcatcgttacttgtgagtggtggagctgattggacggtgcgatcgtgggacgtgaag
ggggcagggggacctcggaccaaaccccaaaaaaatggagcaaccaatggcagtcgcagt
tacggtgaggaggaaagtaccgagacctctgacctattagcgaccttcccgacaaaacgt
acaccaatcacaaatgttcaatttacgtctcgaaatctctgcttggttggaggtgtatat
ttatccccagattctcgataa
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