Psilocybe cubensis (magic mushroom): JR316_0001822
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Entry
JR316_0001822 CDS
T08288
Name
(RefSeq) Lysine--tRNA ligase, cytoplasmic
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JR316_0001822
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcub01007
]
JR316_0001822
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcub03016
]
JR316_0001822
Enzymes [BR:
pcub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JR316_0001822
Amino acid related enzymes [BR:
pcub01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JR316_0001822
Transfer RNA biogenesis [BR:
pcub03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JR316_0001822
Prokaryotic type
Other AARSs
JR316_0001822
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
71968143
NCBI-ProteinID:
XP_047752545
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Position
2:complement(1012714..1015012)
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AA seq
628 aa
AA seq
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MIRLVRPISLLHLHIARPSPAKQITSSQFSFYRKMSSEAPAAGTHKDPVTGEMISKQELK
RREKQRAKEAAKASKAPPASAKPKAAEAGPAEADLNPNQYYEMRCRQIQALKKSQDPAPY
PHKFHVTMSLTSYIKTYGPEGKIAPGDKLPVVESLAGRIHNIRSSGPKLIFYDLHGEGTK
VQILATQQDAKDPESFIATHEHFKRGDIVGVTGNPSRTKKGELSITPHTMQLLAPNLHQL
PSGHFGLKDQETRYRKRYLDLILNNSTRDLFITRSRILNYVRRFLDDLGFMEVETPMMSM
LAGGATAKPFITHHNDLDLDLYLRIAPELYLKELVVGGLDRVYEIGRVFRNEGIDLTHNP
EFTICEFYMAYADMTDLMEITEAMLEGMVKALTGGKTTITYHPDGNKDQPDSRKVVLDFK
RPWKRYDMITTLEEKLNVKFPPGDQLHTEETNKFLRELCVKHNVDCSEPRTNARMLDKLV
GEFIEPLCVSPAFIVGHPQVMSPLAKWHRSRPGLCERFEGFMCGKEFCNAYTELNDPFEQ
RLRFEEQARQKDQGDDEAQGVDETFIDALEHGLPPTGGWGLGIDRLVMFLTDSTNIKEVL
LFPAMKPQDTVPPAATTGGHPLGQSGQI
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgattagacttgtccggccgatatctcttcttcaccttcacatcgcacgaccatcaccc
gcaaaacagattacatcttcccagttttctttctatcgaaaaatgtcgtctgaagcaccc
gctgcgggcacccacaaggacccggtgacgggcgagatgatctccaagcaggagctcaag
cgtcgcgagaagcaacgcgctaaggaagccgcgaaggcaagcaaggctcctcctgcctct
gctaagcctaaggctgctgaggcaggccctgctgaggccgacctgaaccctaatcaatac
tatgagatgagatgccgtcaaatccaggcgctgaagaagtctcaagaccctgctccttat
cctcacaaattccatgtcaccatgtcattaacttcgtacatcaagacatacggaccagaa
ggcaagattgctcctggagacaagctccccgttgtcgaaagtcttgctggccgtattcac
aacatccgttccagtggtcccaagctcatcttctacgatctgcacggcgaaggaaccaaa
gttcagatccttgctacccagcaagacgcgaaggacccagagtccttcatcgctacccat
gagcacttcaagcgtggtgacattgttggtgtcaccggtaacccttctcgcaccaagaag
ggcgaactcagtatcacccctcataccatgcagcttctcgctcccaacctgcaccaactg
ccatcgggccatttcggcttgaaggaccaggagactcgctaccgcaagcgctacctcgac
ctcattctcaacaacagcacccgcgacctctttatcacccgcagccgcattcttaactat
gtgcgtcgattcctcgatgacctgggcttcatggaggttgagacacctatgatgtctatg
cttgccggcggagccactgccaagccgttcattacccaccacaacgacctcgacctcgac
ctgtacctccgtatcgcccccgaactctacctcaaggagttggtcgtcggtgggctcgac
cgtgtatatgaaatcggacgtgtattcagaaacgaaggcatcgatctgacccacaatccc
gaattcaccatatgcgaattctatatggcttacgctgacatgacggatttgatggagatt
accgaggccatgctcgagggcatggttaaggcgctcaccggcggaaagaccaccatcacc
taccaccctgatggcaacaaggaccagccggactctaggaaggtcgttcttgatttcaag
aggccctggaagagatacgacatgatcacgactttggaggagaagctgaatgtcaagttc
ccgcctggcgatcagctgcatactgaagaaacgaacaagttcttgagggagctgtgtgtc
aagcataacgtggactgcagcgaacctcgcacgaacgcgcgtatgctcgacaagctggtt
ggagaatttattgaacctctttgcgtgtcaccagccttcattgttggccaccctcaagtt
atgtctcctcttgctaagtggcatcgttcgcgacctggtctttgtgaacgtttcgaaggc
ttcatgtgtggaaaggagttctgcaatgcctatacggaattgaacgatcctttcgaacaa
aggctccgcttcgaagaacaggctaggcaaaaggatcaaggtgatgatgaagcccaaggc
gtcgacgagacttttattgacgcacttgagcacggtctcccaccaactggtggatggggt
cttggaattgaccgtcttgtcatgttcttgaccgattctactaacatcaaggaggtactc
ctgttccccgccatgaagccccaggataccgtgccccctgctgccaccacaggaggtcat
ccccttggacagtctggtcagatctag
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