KEGG   Psilocybe cubensis (magic mushroom): JR316_0002090
Entry
JR316_0002090     CDS       T08288                                 
Name
(RefSeq) Protein RRC1-like
  KO
K12842  U2-associated protein SR140
Organism
pcub  Psilocybe cubensis (magic mushroom)
Pathway
pcub03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    JR316_0002090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcub03041]
    JR316_0002090
Spliceosome [BR:pcub03041]
 Complex A
  U2 snRNP components
   U2 related factors
    JR316_0002090
 Complex B
    JR316_0002090
SSDB
Motif
Pfam: Surp RRM_1 CID NatA_aux_su PTP-SAK
Other DBs
NCBI-GeneID: 71968411
NCBI-ProteinID: XP_047752808
LinkDB
Position
2:1794206..1796792
AA seq 699 aa
MKLSQYTAGIVRKSRREKEQEAADAKKREEEASAAQVYAEYVNAFEGEDIGRRSSGSAFV
RAESNTAYAPSMSSSERRISRRSPSPSTTSAPKPKGKRAMDSFLEEIKKEQAEREAKYSR
HSHGGHGRSVTAMAAYEGQSGSKDRGDPQTTNLFVANLPQHVTEPNLGKFFARAGPVGSV
KIMWPRADLPPPPGSDSSRRSKGPILNGFVSFMNRRDAEDALREFDGYDWGGYVLRVGWS
KAVPIASKPLYVSSNRIRDRGSRSRSRSRSRTPERHSGRNRDMRSRRSRSPSWDRHRSRS
PRHRRSYSRSRRYSSSRSRSPRRNYSRSPQRTLPDEGEAVTDTFIRAVAFEVKGHDAKYE
ETLREREKANPKYNFLLQRDHRRHAYYKGLVESQEPFKPAFDDEGYNSVYSSDSAEESER
EHTRKNALGPAARKRFEAMLRALAGKRGEIARCMTFCLEHGEAAHEVADIIVSSLLVDGT
AVPRKVARLHLICDILHNSAASVPSAWKYRQEFQSRLGIVFDHLANIYHSFPGRITADLF
KKQITTVVDIWEDWIVFPPDFTTELRTRLEGAVIPTNDIVDEEECIIQPPAAETFSSRFK
TSSFQLAAPTEVVSAQASDGDGEPMDVSSDDDKGASDLDGEPVEDLDIDGVPMDDIDGVP
IEVAGDQVEDDLDGQPIRDDVDGVPIDDDIDGLPLNETS
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgaagttgtcgcagtacacggctggaattgtacgaaagtcccgacgagaaaaggaacaa
gaagccgcagatgcgaagaaacgggaagaagaagctagtgctgctcaagtctacgcagag
tatgtgaacgcgtttgagggtgaagatattggaagacgatcatcagggtcagcatttgtg
agggcggaatctaatacagcatatgccccttctatgtcgtcttccgagcgtcgaatatca
cgcagatctccatctccatctacgacgtctgcgcctaaaccaaaaggcaaaagggccatg
gattcatttcttgaagaaatcaaaaaagagcaggcggaacgagaggctaaatattcacgt
catagtcatggtgggcacggccgttcggtcactgctatggctgcttacgaaggacagagc
ggaagcaaagaccgtggcgatccccaaacgacgaatcttttcgttgcaaatctccctcag
catgtgacagaaccgaacttgggcaagttctttgcgcgagctgggccagtaggctcggtt
aaaattatgtggccacgcgctgacctacctccccctcccgggtcggactcttcacgaaga
tcgaaaggtccaattctcaatggtttcgtatcgtttatgaacaggcgagatgctgaagac
gctctacgagaatttgatggttacgattggggaggatacgtccttagagttggctggagc
aaagcagtccctattgcctccaagccattgtatgtatcctcgaaccgaatcagagacaga
ggcagtcgtagccgtagtcgaagtagatctcgaactcccgaacgacattcgggacgaaat
cgtgatatgcgttctcggcggtcgagaagtccgtcatgggacaggcatcgctctcgttct
ccgagacatcgtaggtcatatagcaggtcacgtcggtattcgagctctcgtagtcgttct
ccccggagaaattattctcgaagtcctcaacgtacactccctgacgagggtgaagcggta
acagatactttcatccgagctgttgcgtttgaggtcaaagggcacgatgctaaatatgaa
gaaactttacgagaacgtgaaaaggcgaatccaaagtacaattttcttctgcaacgagac
catcgaaggcacgcatattacaaaggtcttgttgaatctcaggaaccgtttaagccagct
tttgatgatgagggatacaattctgtttattcgagtgactccgctgaggaatcagagcgt
gaacacacccgaaaaaatgctctaggacccgcagcacgaaaacgttttgaagctatgcta
cgggcacttgctggaaagcgtggtgagattgcccgttgtatgacattttgccttgaacat
ggagaagcagcacatgaggttgcggatatcatcgtgtcatcgttgcttgtagatggtact
gctgtccctcgtaaagttgcgcgtctgcatttgatttgtgatattctgcacaattcagca
gcttcggtgcctagtgcttggaaatatcgtcaagaatttcagtcacgactaggaatagta
ttcgaccatttggccaacatctatcactcatttcctggtcgaataaccgctgatttgttc
aagaagcaaatcacgactgtcgttgatatttgggaagactggattgttttcccacctgat
tttacgacggagcttaggacgagactcgaaggagctgttattcccacaaatgatattgtt
gatgaggaggaatgcatcattcaaccaccagctgcggagacattttcgtcacgattcaaa
accagcagcttccagctcgctgcacccaccgaagtcgtctcagcacaggcgagcgatggc
gacggcgagcctatggatgttagtagtgatgacgacaaaggagcgagcgatctggatggt
gaaccagtcgaagatcttgacattgatggggtgccaatggatgacattgacggtgtgcca
atagaagtggcaggggaccaggtcgaagacgatcttgatggccaaccaatcagagatgat
gtcgacggagttcccattgacgatgacattgatggacttccactaaacgaaacctcatga

DBGET integrated database retrieval system