Psilocybe cubensis (magic mushroom): JR316_0002319
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Entry
JR316_0002319 CDS
T08288
Name
(RefSeq) ATP-dependent RNA helicase DBP10
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcub03009
]
JR316_0002319
Enzymes [BR:
pcub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JR316_0002319
Ribosome biogenesis [BR:
pcub03009
]
Eukaryotic type
Pre-60S particles
Helicases
JR316_0002319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
KH_SLS1_1
Motif
Other DBs
NCBI-GeneID:
71968640
NCBI-ProteinID:
XP_047753036
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All DBs
Position
2:2504898..2507939
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AA seq
938 aa
AA seq
DB search
MPIPKRKHLEEEGNGYSSSSSSSYSTVGFSVGADVDISSALTGKRPKLTDNTDDDDLSSF
LQASIAKRSMKEGTAVMKKSKGKSNLAKGEVGGGSFQSMGLHPSLLRSLTLQGYRTPTPI
QRLSIPALLANPPRDLVGMARTGSGKSLAYMIPLVNRLGGRHSTSFGARGLILLPTRELA
LQVLRVGKELTRGFQTGRGEHAGDKANEDSKKGESLRWGLVVGGENLDEQFEMITSNPDI
IIATPGRLLHLIVEMDLDLKAVECVVFDEADRLFEMGFQVALNEILGRLPTTRQTILFSA
TLPKSLVEFAKAGLQDPKLVRLDSESKISPDLKMAFFSVKQAEKDACLLSLLRDIIKVPF
GSTHVKTLDDDPNLTNRKRKHAEQFTSPHQTLIFTATKHHVEYLLNLLTAAGYSVSHIYG
SLDQAARTFQMDQFRRGVTSILVVTDVAARGIDIPVLENVVNYDFPQGARVFVHRVGRTA
RAGRQGWAWSFVTNTELPYLLDLQLFLGRPLINDVNEQGEHVYTESLVLGNFQREKIDED
VEYIRSLDTAVHSLPVLREVMKRGHTMYERSKGQASPQSYKRAKEIIKDPKWLLAGSHSG
IHPVLLRGPGADEKRQLEDTRKSLLNLVNSFSPSETVFEVTSKGGSENAALMKERRKALE
KSNQRRIVNASILEQGPEDEGPIPTQNVEMADESDIVAVFGSGDAKRCFRDEDFYLSHYQ
KDANTEKGYSLTDGASSFIRQASKVAFDLTNDEGKAERSSNYQTWDKKKKKFIQGDGAGA
DNVKMVRTENGTRLPATFRSGRFDEWKNKSRVSLPRIGEVENLSSTNKASGPGGRRFKHH
KIIEAKPLNKQNTDYDRKIRQLKKKSENAESSGSMASQHTSGNRLGGRRGSTGKTYGRVK
TELKTAEQIRKDRKIMERRKAKNARPSKAGRKKGKGRH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgccgatacctaaacgcaaacacttagaggaagaaggaaatggctattcatcatcatca
tcttcttcgtactcaacagtaggattttcagtgggagccgatgtcgacatttcgtctgct
ttgacgggcaaacgccccaagctgactgacaacacagacgatgacgacctgtccagcttc
ctccaggcttcaattgctaaaaggtccatgaaagaaggaaccgcggtcatgaaaaaatcc
aaaggcaaatctaatcttgcaaaaggcgaagtgggcggcggtagcttccaaagcatgggt
ttgcacccatcgcttctacggtcattaactttgcaggggtatcgtactccaacgccgata
cagcgtctctctattccggcactattggccaatcctcctcgggatcttgtcggcatggcg
cgtactggttcaggaaagtctctagcctatatgattcctcttgtgaacagactggggggc
cgtcactccacatcatttggtgccagaggtctcatcttgcttccaactcgtgaattggca
ctgcaagtcctgagagttgggaaagaactgaccagagggtttcagactggcagaggtgaa
catgctggggacaaagccaacgaagattccaagaagggagaaagtttacgctggggtctg
gttgtcggaggcgagaaccttgacgaacaattcgagatgattacgagcaatcctgatatc
attattgccacacctgggcgcctactccatctcattgtcgagatggacctagatctcaaa
gccgtggagtgcgttgtatttgatgaggccgatcgtttgttcgaaatgggttttcaagtc
gcgttaaatgaaattcttggccgcttacctacgacgcgacaaactattctcttttctgcg
actttgcctaaatcacttgtcgagttcgcgaaagccggtctgcaagatcccaaattagtg
aggttagattccgaaagcaagatcagcccagacctgaaaatggcctttttctctgttaaa
caagctgaaaaagatgcatgtctactatcacttctccgcgacataatcaaagtaccgttc
ggctctacccatgtcaaaacacttgacgacgaccctaacttaacaaatcgtaaacgcaaa
cacgcggaacaattcacctctcctcatcaaactctaatatttaccgctactaagcaccac
gtcgaatacctcttgaatttattgactgctgcgggttattctgtatcgcatatctacggt
tctctcgaccaggcagctcgtaccttccaaatggaccaattccgtcgcggcgttacgagc
attctcgtggttacagacgttgccgctcgtggtatcgatatcccagtccttgaaaatgtc
gtgaactacgacttccctcaaggagcgagagttttcgttcaccgcgttggaagaactgct
cgcgcaggtcgccaaggttgggcatggtcatttgtgaccaataccgaactaccgtacctg
ctagaccttcaactgttcctaggaagaccattgatcaacgacgtaaatgaacagggcgaa
catgtttacaccgaatctctcgttttaggaaatttccagagggaaaaaattgacgaagat
gtcgaatatatccgttctcttgacactgccgtacattctttgcctgttcttcgcgaagtt
atgaaacgtggtcatacaatgtacgaacgcagcaaaggacaagctagtccacagagttat
aaacgcgcgaaggaaattattaaagacccaaaatggttgttggctggatcgcactctggt
atacaccctgtgctgttacgaggtcccggggctgatgaaaagcgacagctggaggatacg
agaaaaagcttgctcaaccttgtcaactcgttcagcccctcagagacagtatttgaggta
acatcaaaaggtggcagtgaaaatgcggctttgatgaaagagcgaaggaaggcgctggaa
aaatctaaccagcgaaggatcgtgaatgcctcaatattggaacaaggaccagaggatgaa
gggcccattcccacgcaaaatgtagaaatggcagatgaaagcgacattgtggccgttttt
ggttccggagatgctaagagatgttttcgcgacgaggatttctatttatcacattaccaa
aaggatgcaaacacagagaagggttattctttgaccgatggggcgtcctcgttcatcagg
caagcgtccaaagttgcgtttgatctcaccaatgacgaggggaaggcagaaaggagtagc
aattatcagacatgggataaaaagaagaagaagttcatccaaggagatggtgctggtgcc
gataacgttaaaatggtgcgcacggaaaacggtactcgtcttccagcgacgttccgtagc
gggcggtttgacgaatggaaaaacaagagccgagtgagcttgcctagaataggagaggtg
gaaaatttgtcttccacaaataaggcttcaggacctggaggccgtcgcttcaaacatcac
aagatcatcgaggccaaacctctcaataagcagaacactgattatgaccgcaagatccgt
caattgaagaagaagagcgaaaatgcagagtcatctggaagcatggcttcacaacacacc
tctggtaacaggttgggaggtcgccgtggatctactggtaagacatacgggcgcgtcaag
accgaactgaagacggcggaacagatcagaaaagatcggaagatcatggaaaggcgcaag
gcgaagaatgcacgcccatcgaaggcaggaaggaagaaaggaaagggccggcattaa
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