Psilocybe cubensis (magic mushroom): JR316_0003437
Help
Entry
JR316_0003437 CDS
T08288
Name
(RefSeq) Pre-mRNA-splicing factor srp2
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JR316_0003437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcub03041
]
JR316_0003437
Spliceosome [BR:
pcub03041
]
Common components
Common spliceosomal components
SR proteins
JR316_0003437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_3
DbpA
SET_assoc
Motif
Other DBs
NCBI-GeneID:
71969758
NCBI-ProteinID:
XP_047751584
LinkDB
All DBs
Position
3:2009295..2010732
Genome browser
AA seq
293 aa
AA seq
DB search
MSRRLYLGRLPTDARSEDVSKFFDGYGRIIDCRVMTGFGFVEFENAKDAEDAVHNFNGKP
FMGVNIVVEFAKESRPRREVYEDRGGYGAPRARRPPGIRLIVSGVSRDTSWQDLKDFGRD
AGSVSFADIDRDIPGQGVLEYLSREDADRALKELDGKELRGRPVRVALDDSRSGPDNYRR
DDRRDDRRDDRYSRDDRNDRYRRDRSRSPPRRGEYEDRRSARSPPSRREADDKRPAGYDD
YRRGGYDDRRGPDYYYDRRRDDQDRRRDDRRRDDKEDRYDDRPRHANGEGWSR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtctagacgcctttatcttggcaggctacctaccgatgcccgttcggaggatgtttcc
aaatttttcgacggttatggccgaatcatcgactgtcgtgtcatgactggttttgggttt
gttgaattcgaaaatgcaaaggacgccgaggatgctgtccacaacttcaacggcaaaccc
ttcatgggtgtcaatattgtagtcgagttcgccaaggaaagtcgtcctcgtcgagaggtt
tacgaagacagaggcggttatggagctccccgtgcccgtaggcctcctggaatccgcctg
attgtatctggagtttcccgtgacactagctggcaggacctgaaagactttggtcgggat
gctggcagcgtctctttcgctgatattgatcgtgacattcccggacaaggagtacttgag
tatctttctagagaggatgctgatcgtgctctcaaggaacttgatggcaaagaacttcgt
ggacgccctgttcgcgtcgctcttgacgactctcgttccggacctgataattatcgtcga
gacgatcgtcgtgatgatcgtcgcgatgaccgatacagtagggatgaccgtaatgacaga
tatcgccgtgatcgttcaaggtcgcctccccgccgtggtgaatacgaagaccgtcgttcc
gccaggtcgcccccttccagacgggaggctgacgataaaagacctgcagggtacgatgat
taccggcgcggaggttatgatgaccgcagagggcctgattattattatgaccgacgtagg
gatgatcaagatcgtcgtcgagatgacagaagacgcgacgacaaagaagatcgatacgac
gacaggccaaggcacgcgaatggtgaaggatggtctcgttga
DBGET
integrated database retrieval system
