Psilocybe cubensis (magic mushroom): JR316_0003458
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Entry
JR316_0003458 CDS
T08288
Name
(RefSeq) Nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03013
Nucleocytoplasmic transport
pcub03015
mRNA surveillance pathway
pcub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JR316_0003458
09122 Translation
03013 Nucleocytoplasmic transport
JR316_0003458
03015 mRNA surveillance pathway
JR316_0003458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcub03019
]
JR316_0003458
03041 Spliceosome [BR:
pcub03041
]
JR316_0003458
Messenger RNA biogenesis [BR:
pcub03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
JR316_0003458
Spliceosome [BR:
pcub03041
]
Common components
Common spliceosomal components
Cap binding complex
JR316_0003458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
71969779
NCBI-ProteinID:
XP_047751605
LinkDB
All DBs
Position
3:2065881..2066746
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AA seq
229 aa
AA seq
DB search
MAHVVSPLDQPSNYKDSQTRVDRQKQNDLLAKSTTLYIGNLSFYTTEEQIYELFTKCTSP
EDGGGIKRIIMGLDRNTRTPCGFCFVEYYTHAEALASMRYVSGTKLDERIIRCDLDLGYK
EGRQFGRGKSGGQVRDEHRQDYDPGRGGWGAQAQRIEIERRREVEERYADAQDGPGAVAG
GGGDWKQENVSQVEKKKRARSPEDEGEGDSDVRLGQRPKMDEEMEAERM
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgtagtctctcccttggaccaaccttcaaattataaggattctcagacccgc
gtcgaccgccagaagcaaaatgatctccttgcaaagtcaacaacactttatattggtaac
ttgagtttctatactacggaagagcagatatatgagctctttacaaaatgtaccagccca
gaggatggtggagggattaaacgaatcattatgggccttgacaggaacacaaggacacca
tgcggattctgctttgtagagtattatactcatgcagaagctctcgcaagtatgcgttat
gttagtggcaccaaacttgacgaacggataatacgttgcgaccttgacttgggctacaag
gaaggtcggcaatttggacggggtaaaagtggtggtcaggtaagagatgaacaccggcag
gattatgacccaggccgtggaggatggggtgctcaggcccaacggattgaaattgaaagg
aggagggaagtcgaggaacggtatgctgatgcccaggatggtcctggtgctgtggcaggt
ggaggtggggactggaaacaagaaaatgtatcccaagttgaaaagaaaaaacgagcaagg
tcaccagaagacgaaggtgaaggtgacagcgatgtacgccttggccaaagaccaaagatg
gacgaggaaatggaagccgaaagaatgtaa
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