Psilocybe cubensis (magic mushroom): JR316_0004080
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Entry
JR316_0004080 CDS
T08288
Name
(RefSeq) putative endonuclease 4
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JR316_0004080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcub03400
]
JR316_0004080
Enzymes [BR:
pcub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JR316_0004080
DNA repair and recombination proteins [BR:
pcub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JR316_0004080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
71970401
NCBI-ProteinID:
XP_047752223
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All DBs
Position
3:complement(3970594..3972344)
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AA seq
396 aa
AA seq
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MVLTRQSTRASSMASQLQAITVETSTGSTCKPRKKRTKVSEDESQETTSSSKPKRARKLK
PEVDKSEFLPRAQSQWKVGAHVSAAGGVENAVLNAASIGANSFALFLKSQRKWESPPLSN
ESITEFKRLMKELGYESRMVLPHGSYLINLGNPDAAKREKSFACFLDDLKRCEALGLELY
NFHPGSTVGETSVETSLSLIADCINRAHVETSRVTVVLENMAGAGNIIGSDFGHLAGIIK
LVKDKLRVGVCLDTWSQVMHSLRVMIFERKMAGITKFDEQIGLKYLCGMHLNDSKTEYNS
KKDRHENIGLGHLGLLSFVHILNDPRTQNIPLILETPSFEQAKEIWGTEISVLQRVSGEG
NVCHHNGTTKEGEHLVDIDALVNQLKKSVLNGAKRN
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggttctcactcggcaatcgacgcgcgcgagttcgatggcatctcaacttcaagctatc
accgttgaaacttcgacgggatctacatgtaaaccacggaaaaagaggacaaaagtctct
gaggatgaatcgcaggaaaccacaagttcctcaaaacctaaaagagcacgaaagttaaag
cctgaggtcgacaaatctgagtttctacccagagcgcagagtcagtggaaagttggagca
catgtatcagcggctgggggtgtggaaaatgcggtcctcaatgccgcttcaattggtgca
aactcgtttgctctatttttaaagtcgcagcgcaaatgggaatccccacctctaagcaac
gaatccataaccgaattcaagaggctcatgaaagagctcggatatgaaagcagaatggtg
ctacctcacggaagttatctaattaatcttggaaaccccgacgccgcgaaacgggaaaaa
tcatttgcgtgctttttggacgacttgaaacgatgcgaagctcttggccttgagctatat
aattttcatccagggtcaaccgttggggaaacgtctgtagagacgtcactcagtctcatc
gcagattgtatcaatcgcgcacatgtagaaacaagccgagtcacggttgtcctagaaaac
atggcgggtgccgggaatatcattggctcggacttcggtcatctcgctggaattatcaag
cttgtcaaagataaattgcgggttggcgtgtgtctcgatacttggtcacaggtcatgcat
tcgctgcgggttatgatattcgaacgaaagatggctggaataacaaagttcgatgaacaa
atcggcctgaaatacctttgcggaatgcacctaaacgattccaagacggaatacaacagt
aagaaggatcgacacgaaaacatcggactgggacatcttggtcttctctcattcgttcat
atcttaaatgacccacggacccaaaatatccccttgatattagagaccccaagctttgag
caagccaaagaaatatggggtacagagatatctgtgcttcaacgtgtctctggggaagga
aatgtttgtcatcacaacggcactaccaaggagggggaacacctggttgatattgacgct
cttgtcaaccagctgaagaagtccgtgctaaatggggccaagcgtaattag
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