Psilocybe cubensis (magic mushroom): JR316_0004403
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Entry
JR316_0004403 CDS
T08288
Name
(RefSeq) Poly(A) polymerase pla1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
JR316_0004403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcub03019
]
JR316_0004403
Enzymes [BR:
pcub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
JR316_0004403
Messenger RNA biogenesis [BR:
pcub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
JR316_0004403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Polbeta
Motif
Other DBs
NCBI-GeneID:
71970724
NCBI-ProteinID:
XP_047749930
LinkDB
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Position
4:<913434..>916177
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AA seq
630 aa
AA seq
DB search
MQNSNNNSYLGVTPPISVLESNAREKEVTVTLMEELRRQNTFESEEEAKTREIVLGRVAA
LVKKFVKKVSMDRGLSESAANAAGGKIFTFGSYRLGVHAPGSDIDTLCVVPKHVSREDFF
DVFEPMLKEMEGATDVSGVPEAFVPIIKAEISGIPLDFLMARLALSSVPDNLSLKDDNLL
RSLDERCVRSLNGSRVIDEILRLVPNVQVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWA
LLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPADRA
HRMPIITPAYPAMCSTHNVTQSTQMIITEEFKRGAEIVDRVIVGTAEWSELFAKHDFFHK
YRYYLQVIASTANQDLQTKWAGTVESRLRQLVMKLEYVDSLILAHPFIKGFDQVSYCLSD
DEIRAVAQGEISDVVASRKKEDIEGKEGASPVYSTTFYIGLAIEPKPAGAVGPRKLDISY
PTMEFTKLVKMWDKFDESTMGIIVRHIRSSGLPDNVFDPGERPAKTVQKRVKGAGKSSNT
SPDMPNKRQRLVIAFFDVKLRLIEMPCLPSFLSSSQSTSDLPLKLTENGSTGNTPSLPPV
AETLTPKDSKAPQLPFGENVAVATGAVTAQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaactcaaataataatagttatttgggtgtgacgccacccatctcagtgttggaa
tcgaatgcgagggagaaagaggtcacggtgactttgatggaggaactcagaagacagaat
acatttgagtcggaggaggaagcgaagacaagggaaatcgttcttggccgagtcgctgct
ttggtgaagaagttcgtcaaaaaagtatctatggatcgaggtttatcagaaagtgctgcc
aatgcagctggaggcaagatttttactttcggatcttatcgactaggtgtacatgcacca
ggttctgatattgataccctttgtgtggttccaaaacatgtatcccgggaggatttcttt
gacgtttttgagccaatgttgaaagagatggaaggtgccactgatgtttcgggagtacct
gaagctttcgtgccaattatcaaggctgaaatatctggaatccctctcgattttctcatg
gctcgccttgcattatcatcagtgccggacaacttgtcgttaaaagatgacaatctatta
cgaagtttagatgaaagatgtgtcagaagtttaaatggctctcgagtaattgacgaaatt
ctacgactggttccaaatgttcaagttttccgcgatgctttgcggtgcattaagttatgg
gcgcagcggagagccatctattctaacgttaatgggtttcttggcggtgtggcatgggcg
ctgctagtcgctagaatatgtcaactatatccaaatgctattgccggtgctattgtcagc
cgtttcttcataataatgtaccagtggtcatggccacagccagtactcctaaaacagata
gaagaaggccctctacaagtccgagtatggaacccaaaattatatcccgccgaccgagca
catcgaatgccaattatcacaccggcataccctgcaatgtgctctacccacaacgttacg
cagtcgactcaaatgatcatcacggaggaattcaagaggggtgctgaaattgtggatcgg
gtcatcgttggtactgctgaatggtcagaactatttgcaaagcacgatttcttccataaa
tatcgatactacctgcaagtcattgcatcaacagctaaccaagatctacaaactaaatgg
gcaggcaccgtcgaatcgcggcttcgtcagctggtcatgaaactggaatatgttgactca
ttgattcttgctcaccctttcattaaaggctttgaccaagtgtcatattgcttatcagac
gatgagattcgtgctgtagctcaaggtgaaatatccgacgtcgtggccagcagaaaaaaa
gaagatatagaaggcaaggaaggtgcaagtcctgtatattcaacgactttctatattggc
cttgccattgaacctaagccagctggggcagttggccctcgaaaacttgatatatcatat
cctacaatggaattcaccaaattggtaaaaatgtgggacaaatttgatgaatctacaatg
gggattattgtgcgacacatccggagttcgggcttgcctgacaatgtcttcgatccagga
gaacgccctgctaagaccgtacaaaaacgagtaaagggagccggaaagtccagtaatacc
tcgccagacatgccaaacaaacgccaacggttggttattgcgttttttgacgtgaagctc
agactcatcgagatgccatgcttaccttctttccttagctcttctcaatcaacatcagac
ctacccctcaaactcaccgaaaacggttctaccggaaatactcccagtttgcctcctgtt
gctgaaaccctgactccaaaggattctaaagcccctcaattgccctttggggagaatgtg
gctgttgcaacaggagcggttacagctcaatag
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