Psilocybe cubensis (magic mushroom): JR316_0004495
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Entry
JR316_0004495 CDS
T08288
Name
(RefSeq) Putative helicase mug81
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcub03019
]
JR316_0004495
Enzymes [BR:
pcub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JR316_0004495
Messenger RNA biogenesis [BR:
pcub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
JR316_0004495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_19
UvrD-helicase
AAA_22
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
71970816
NCBI-ProteinID:
XP_047750020
LinkDB
All DBs
Position
4:complement(1193056..1199034)
Genome browser
AA seq
1600 aa
AA seq
DB search
MANFLAHIEALLGSSDRTQPKADTTSWTRISKILKGEEGQGFAEDDSLWEERDYEAEASV
LDLYRLQEPSGTPDTSLLLSVLYKKADADHISQSVLSILSSHRTNDEISGELCELLGYDE
IELVMQILDNRSAVIQQLNVGPTFSKHDNSVVQSKQSKNESYSFSKESVRRRMQQQLDAN
ASRPLYSGTEQAAPEILPHVYTSSNATQGNVVSQFGSKYMLPLGTTRETYEEYEEVVIPP
AKPVPPRSSERLINISELESIVQGSFTGYSALNRIQSIVYPTAFGSNENMLICAPTGAGK
TDVAMLTILRVIDQHRLQNKSSSNLPIHQTIDRDAFKIIYVAPMKALASEIVRKLGKRLA
WLSIEVRELTGDMQLTKAEIARTQVIVTTPEKWDVVTRKPTGEGEIASSLKLLIIDEVHL
LNEERGAVIETIVARTLRQVESSQSMIRIVGLSATLPNYKDVAEFLSVSRHKGLFYFDSS
FRPVPLEQHFLGIKGKPGSSLSRKNLDTVTFQKVSDLVAEGHQVMVFVHARKETVKTATS
LREMAVLEGNMEHFICEDHPQFNFFRQKIGESRNKEMKQLFDSGFGIHHAGMLRSDRNMM
ERMFEARAIKVLCCTATLAWGVNLPAHAVVIKGTQVYDSGKGKFVDLSVLDVLQIFGRAG
RPGLESSGEGYICTTEDKLTHYLDAVTSSIPIESQFQAGLMDALNAEIALGTVANRRDAV
QWLGYTYLFVRMRMNPFVYGIPRESVEDDPQLGTKRNELIAIASKKLFETKMITYDAQQS
QFQITDLGRIAAKYYIRYTSIEIFNKEFRPRMSEADVLAMLSMSTEFEQIQVRESEVKEL
EEIMERVPCEVKGGTDTSAGKVNILLQGYISREMVEDFALVSDMAYVAQNGGRIVRALLE
IAVSKKWANVTSVLMAMSKSIEGRMWSFDHPLRQFNLKPETMFSLEKWADDLSVSDIAGM
EASSIGEMVHLNEAHGLAILNAAKQFPTIHITYTLRPITSEVLKISVGLTRAFEWASKVH
GTSEPFWIWIEEEKGANILQLSHIIFHPTTEFLDLDFFISIPNGQLPQFVTIRSISDRWV
GAEDSVMVTFDYVIMPPTSRPHTPVLNLPFLTIDDIQSSFPKDVIPRRFHTLNVLQTQSY
WNFIHNKRNALICAPAASGKSTLARMAVWNTISKLTDGWILVITPTKIAAMDMVSELRPG
ANSNGILLEYGGDTKRLFSTPKSRTIRVATADQLIHAFPASIHLTKLTRLELVVCDAMEQ
LTSAYEFSISMLRLAAKSSPVRFIGLSSSINDASDLAKWLSVDSTAIHSFRPQDRDQSLI
TTRKTFSIPYSASLFKAMAKPAHRAIQDAPPGSLAIVFVPSRGQCRSIALDLITRCTLEM
ETGRGYIPDVISDDLVGDYCARLQDTSLLDYVLKGVGFYHQGIPKHDRNLMLEMFAEGII
RVLVVPKDSCWSLPARASVVVVMGTQYVHIEEEGSLRQIRDYSLTEVVRMQSRAIQESGT
GHFHLFCQADALETYSRFLDEGLPLESDLAESETLRDWVKSLQSYSTNADKQQIVDALSF
TYLAQRVVSNPSYYGFTGSDRDTNLSAIVDHVIDEIYAKK
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactttttggcccacattgaagccttgcttggctcgtcagaccgcacacaacca
aaggcagataccacttcatggacaaggatatcgaagattctgaaaggtgaagagggtcaa
ggctttgctgaagatgattctctttgggaagaacgcgattatgaagcggaggcctccgtt
ctggacctttatcgcctgcaagagccttctgggacgccagacacgtctctgctactttca
gtactgtataaaaaagctgatgcagaccatatttcccaatctgtactgtccatattgtct
tctcatcgaaccaacgatgagatatctggggagctctgcgagctcctgggatacgacgaa
attgagctggttatgcaaatacttgacaatcggtctgcggtcatccaacagctaaatgtc
ggccctacattttcgaaacacgacaattctgttgttcaaagcaaacaatcaaaaaacgaa
tcttactcattttcgaaagaaagtgttcgtcgaaggatgcaacagcaattggatgcgaat
gcttcccgtcctctgtacagcgggactgagcaagctgctccagaaatacttcctcatgtc
tatacatctagcaacgcaacacaaggaaacgtagtatcccagtttggatccaagtacatg
ttacctctgggtacaacaagggagacctatgaagaatacgaagaagttgttataccgcct
gccaaaccggtgccacccagatcgtcggaacgtctcatcaatatttcggagctcgagagc
atcgttcaaggcagttttacgggatattcagctctaaatcgaattcagtccatagtatac
cccactgcttttggttccaatgaaaacatgctcatttgtgcacctactggcgcaggaaaa
acagacgttgctatgttgacaatcttgcgggtaattgaccaacatcgattgcaaaataaa
tcttccagcaatttgcccatccatcaaaccatagatagagatgcatttaaaatcatctat
gtggcccctatgaaagcgctcgcttcagaaatcgtccggaaacttggaaaacgtttagct
tggctttcaatagaagtccgagaattaactggtgatatgcagttaacaaaggcagaaatt
gcacggacacaagtcatagtaacgaccccagaaaaatgggacgtcgtcaccaggaaaccc
acaggagaaggagaaattgcatccagtttaaaacttttgattattgatgaggtgcatctg
ttaaacgaggaacgaggggcggtaatagaaacgattgtagcgaggactttgcgacaggtg
gaatccagtcaatctatgatccggattgtaggtctcagtgctaccttgccgaattacaag
gacgttgcagaattcttaagtgtgtctcgacacaaaggtcttttctacttcgattcttcc
tttagacctgttcctttagaacaacactttctgggaatcaagggtaaaccaggaagttca
ctgtcacgtaaaaaccttgacactgtcaccttccaaaaggtttcagacctggttgcggaa
ggccatcaagtcatggttttcgttcatgcacgtaaagagacagtcaaaacggcaacaagt
cttcgcgagatggcagttttagagggcaatatggaacatttcatctgcgaagatcatccg
caatttaattttttccggcagaagattggggagtccaggaacaaagagatgaagcaattg
ttcgatagtggctttggaattcatcatgcaggtatgcttcggtccgaccgcaatatgatg
gagaggatgtttgaagcaagagcaataaaggtcctttgctgcacggcgacattagcttgg
ggtgtcaacctaccagcgcacgcagttgtcatcaagggaacacaagtgtacgacagcggg
aaaggaaaatttgtcgatttatctgtactcgatgtacttcaaatctttggtcgtgctggt
aggccaggtttagaatccagtggggagggttatatctgcaccaccgaagacaaactgact
cattaccttgacgctgtcacttcctcgattcctatcgaatcacagttccaggcgggccta
atggatgctctgaacgccgaaattgcattgggtactgtcgccaaccgtcgcgatgcagtg
cagtggttgggctatacatatctctttgtcagaatgcgtatgaacccgttcgtttacggt
atccctcgcgaatctgtagaagatgacccgcaactcggtactaagagaaacgaacttatc
gcaattgcatccaagaaactttttgaaaccaaaatgatcacatatgacgcacagcaaagt
caattccaaataacagacctagggcgaattgcggcgaaatattatattcgttatacctca
attgaaattttcaataaagaatttcgaccgaggatgtcggaagcagatgtgcttgcgatg
ctgagcatgagtacagagtttgaacaaattcaagtcagagaatcggaggttaaggaactg
gaagaaatcatggagcgagttccatgcgaagtcaagggtggtacagacacaagtgcaggg
aaggtcaacattttattgcagggttacatttccagagagatggtcgaagattttgctctc
gtttctgacatggcttacgttgcccaaaacggaggacgtattgtgcgtgctcttctcgaa
atagcggtcagcaagaaatgggccaatgtcacatctgttctgatggctatgagcaaatca
attgaaggcaggatgtggtcgtttgaccatcctctccgccagtttaatctcaaaccggag
acaatgttttctctggaaaaatgggcagacgacctctctgtatctgacatagctgggatg
gaagccagtagtattggggaaatggtccatctcaatgaagcacacggattggcaatactt
aacgctgcaaaacaattccctacaatacatatcacttatactctgcgtcccatcacttcg
gaggtcctcaaaatttcagttggcttgactcgcgcatttgaatgggcttctaaggttcat
gggacaagtgagccattttggatatggattgaggaagaaaaaggagcgaatattttgcaa
ctgtcccatatcattttccatccaacaaccgagtttttagacctggatttcttcatatca
attcctaatggacaacttcctcaatttgttactatacgttccatctcagaccgttgggtt
ggtgcagaggattcggttatggttacgttcgactatgtgataatgcccccaacctctcga
cctcataccccagtccttaatctccccttcttaacgattgacgacatacagtcatccttc
ccgaaagacgtcattcctcgaaggtttcatactcttaacgttttgcagacgcaatcgtat
tggaacttcatacataataaacggaatgcccttatttgtgctcctgcggccagtggaaaa
tctactttagccagaatggccgtatggaatactatctcaaagttaactgatgggtggata
cttgtaataactccaacaaaaatagctgctatggacatggtatccgaacttcgccctgga
gccaactcaaacggaatccttctagaatacgggggtgacacaaaacgtcttttttcgaca
ccgaagtctcgcaccatccgtgtagcaactgcggaccaattaatccacgcctttccggcc
agcatacatctgaccaagctgactcgtcttgaactggtggtttgcgacgccatggagcag
cttacctctgcatatgaattttccatctcgatgcttcggcttgcggccaaatcgtcccca
gtgcgattcattgggctttcttcttctatcaatgacgcgtctgatcttgctaagtggcta
agcgtcgatagtacagcgatacacagcttccgacctcaagatcgcgatcaatctttaatt
actactcgaaaaacgttttcgataccctattcggcgtctctcttcaaagcaatggcgaaa
cccgcacatcgagcaatccaggatgcacctccaggatctttggccatcgtctttgttcca
tcccgagggcaatgccgatccatcgctctcgatcttatcacaaggtgcactctagagatg
gagacgggtagaggatacattcccgacgtcatatcggatgatttagtgggtgattattgc
gcaaggcttcaagacacaagccttttggattatgtcctgaaaggcgttggtttttaccat
cagggaataccaaagcacgaccggaacttgatgctggaaatgttcgcagaaggaattatc
cgtgtcttggttgtccccaaagattcatgctggagtctccccgcgcgagcgtccgtagta
gttgtgatggggacgcaatacgtccatattgaagaggaaggctcactacgtcagattcgg
gactacagtcttacggaagttgtgagaatgcagagtcgggcaattcaagaatcaggcacg
ggtcacttccatctcttttgccaggcagatgctttggaaacctattctcgcttcctcgac
gagggtctccctctcgaatccgaccttgcggaaagcgaaactcttcgtgactgggtcaaa
tcattgcagtcatattcaaccaacgctgacaaacagcaaatcgtcgacgcgttatccttc
acttatttagcccaaagggtcgtcagtaatccatcttactacggctttacgggatctgat
cgcgatactaatttgtctgcaatcgtggatcatgttatagacgagatatatgcgaagaaa
taa
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