Psilocybe cubensis (magic mushroom): JR316_0004796
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Entry
JR316_0004796 CDS
T08288
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JR316_0004796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcub03009
]
JR316_0004796
Ribosome biogenesis [BR:
pcub03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
JR316_0004796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_RFWD3
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_SCAP
Cytochrom_D1
Beta-prop_VPS8
Beta-prop_HPS5
WD_LRWD1
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
71971117
NCBI-ProteinID:
XP_047750321
LinkDB
All DBs
Position
4:complement(1953690..1955467)
Genome browser
AA seq
519 aa
AA seq
DB search
MDYQSLVVKTHNRPSTSKHTAESRYWRQFKHPVFVKEYAPITSVHFSPSKPHRYAVTAAT
RVQIYAPRTQKLTKTISRFKDVARSGCIRGDGKLVVAGDDSGLIQIFDINSRAILRTLDS
HKQPVHVTKFSSLSPTHVLSCSDDTTVKLWDVPSQTAVTTFTEHTDYVRAGQISTANHNI
ILTGSYDGTVRLFDARSGLSEMVMATGDRQEHSDIAPVEQVLMFPSGTVALSTSGPILRV
WDIVAGGRCTRALSNHQKTVTALTFNANSDRLLTGSLDQMVKVYDVSTYKVVHTMRYPSP
VLCLAISPDDTHILGGMSDGTLSIRRRDPKASEIVQSDQTRLDAPALLHDINIGHGLQHQ
KLPIKPLMDSSELRVQSQSTRKLKEYDKLLKSFKYSAALDSVLKKNVPPTVTFSLIQELI
HRDGLRIALAGRDDVLLEPILRLLSKYISDPRFGELAADVTGLVIDMYTSVIGQAPLIDA
LFLRLRKKVAAELRFQEEIVRAKGALTMILSSAITPAAR
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggactaccaatccctcgtcgtaaaaactcataatcgcccttctacttccaaacacaca
gccgagtccagatattggaggcaatttaagcatcccgtcttcgtaaaagaatatgcccca
atcacatctgtccacttttctccctcaaaaccgcacaggtacgctgtgactgccgccacc
cgagtgcaaatatatgcaccccgcacccaaaagctcacgaaaacaatatcacgattcaag
gacgtcgctcgaagcggatgtattcgaggagacggcaaactcgtagtagctggtgacgat
agcgggttgatacagatttttgatattaattctcgagccattcttcgcacactggattct
cataagcaacccgttcacgttaccaaattttcttcactgtcaccaactcatgttctgtct
tgttctgacgatacaactgtcaagttatgggatgtaccctcgcaaactgcagtcacgacg
ttcacggagcatacagattatgttcgtgctggacaaatttcgactgcaaaccacaatatc
attcttaccggttcctatgatgggacagtcagattattcgacgcacgctcaggcctatcc
gaaatggttatggctaccggtgatcgacaagaacactcagatatagctcctgttgaacag
gttttgatgtttccctcaggcaccgttgcgttatcgacatctggtccaattcttcgagtc
tgggacattgttgcgggaggtcgatgtacacgagcgttgtcaaatcatcagaaaactgtt
actgctcttacttttaatgccaatagtgatcgccttcttactggaagcttggatcaaatg
gtcaaagtttacgatgtctccacatataaggttgttcacacaatgcgatatccgtcgccc
gtactttgtttggctatctcgccggatgacactcatatactgggaggaatgtcggacggc
actctatccattcgaaggcgagaccccaaagcaagtgaaatcgtccaaagtgaccagacc
cgccttgatgctccagctcttctccatgatatcaatatcggacacggtttgcaacaccaa
aaattgcccattaaaccgcttatggattcttcggaactgcgagttcaaagtcaaagcaca
agaaaattgaaagagtacgacaagttgctcaagagcttcaaatattctgctgccctagat
tcagtgcttaaaaagaacgtgccacccactgtgacattttcactgatccaagagctaatc
caccgtgatggactccgaatagctcttgctggacgcgacgatgttttgcttgaacctatt
cttcgtttactttcgaaatatatttctgaccctcgatttggagaattagcagctgatgtc
actggcctagtgattgacatgtatacatctgtcattggtcaggcacctcttatcgatgcc
ctctttctacggttacgtaaaaaggttgcagcggaacttcgctttcaggaagaaattgtg
cgagcaaaaggtgctttaacaatgattctgtcatctgccattacaccagccgctagataa
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