Psilocybe cubensis (magic mushroom): JR316_0004807
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Entry
JR316_0004807 CDS
T08288
Name
(RefSeq) Virulence protein SSD1
KO
K18748
protein SSD1
Organism
pcub
Psilocybe cubensis (magic mushroom)
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcub03019
]
JR316_0004807
Messenger RNA biogenesis [BR:
pcub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
JR316_0004807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_S1
Rrp44_CSD1
Motif
Other DBs
NCBI-GeneID:
71971128
NCBI-ProteinID:
XP_047750332
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All DBs
Position
4:1976432..1981449
Genome browser
AA seq
1447 aa
AA seq
DB search
MTDEITPPTLPLVKKEEKKPASSGNNRGPKRQTSNSSNSRGGAPGARPSSRGSNKKTQTQ
TNTAAVESGSDTASRKGSDNGKKQDQRAKNPSTGGRGPPQRRGHPPASQGTRTPKDQSQN
KQSSSPAPAQGKESSDALSSLQRVIADLKTTSPVQPPAGSNNLASMPGSQGHTLPLHAPT
FQPGAGAYHGTNVDQKHRKAASLGNSSLSGNFNSYSPHLGAMMEDVEDGSGSFEEGEIPE
RYYQGGHQPRSQSQSFMAPRFAALAAQQEQDTVGPTGRPQLAPGFMFGARKRGPPMGPPI
NEEDIGFQFPQQQQNYLPEVGQKEQGHRKTESGEITGIMAEQIALQNQIEALQQQQQALY
QQQLASNQVLSFQTPGLAPHRGAHRRVQSTVPMSPSSGATFGSLQHPMGQFGSIGGLNLG
LDGQTQGIPRGHGRRHSVTVVNKTVSQPNMGSTAFEGFDEGFTPPVPAMGGHSRQTSRVD
SSWRINGGVGGIQGNNGGFATDLAQAQAQLQSLQQFRAAAGGHHHKMPSFSFPNMLPNMM
AANMMGIGLGGINLLQQQQQQFQSQLQQQSNQPQRKSLFAPYLPQASLPPLLAAGKLVVG
ILRVNKRNRSDAYVATEVLDADIYICGSKDRNRALEGDIVAVELLDVDEVWGTKKEKEEK
KRKKEENAAYDLKSNTGRKDDKKKDDVEVEGQGLMLFEDEEVTDEIKPQFAGHVVAVVER
MPGQLFSGTLGLLRPSSAATKEKQEAERREREGDKGDEPRRPIERPKIVWFKPTDKRVPL
IAIPTEQAPPDFVQNSEAYVDKLFVACIKRHPISSLHPFGTLVEELGPIGDIEVETSALL
KDCNFPTEDFTDNVLKCLPPIPWTIPEREVETRKDLRGERIFSIDPETAKDIDDALSIKA
NDDGTFDVGVHIADVSFFVKPNTPLDRDARKKATSVYLVQRAVPMLPPTLSEQLCSLLPG
QDRLAFSVVFTMDNEARITKKWFGKTIIRSVAKLAYSDAQKVIDGQPLSDVPIDTGHNPS
DIERDIMGLQNLAKKLRARRFENGTLSLESLKLSFTLDENGLPTDCGQYERKEANTLIEE
FMLLTNISVAQQIAVHLPEQALLRRHDTPLERRLNSFNQRAERLGYTMDTSSAGALMKSF
NAIDNPTARRLLELLSFKATQRAKYFCSGMLDIAKYWHYALNTPLYTHFTSPIRRYADIL
VHRQLEAVLQGGAETKFTMDRDAVAKVAQQCNIKRDSAVLAQEQSAHLFLCVLISDLTNR
YGPVIRQAKVVGVLDAAFDVLVPEFGIEKRVHVDQMPIDNHVYDEHTHTLQIYWSNRDVI
SWLAENSDDEHLRKVKQNAEQHALKMEVVSRSVHDESALFDEDDADDDEIVLGRSETLPE
KPETSKQRLLSMAKVKPEFEGVRVTASGHKIQEIRELMTVPVIVTADLTKSPPVIKVYSV
NPYAEQK
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgagattacgccgccaactctccctctcgtcaagaaggaggagaagaagcct
gcctcttcgggtaataaccgtggaccaaagaggcagacttccaactcgtctaattcacga
ggtggtgctcctggtgctagaccttcctccagaggtagcaacaagaagacccagacccaa
accaacacggcagccgtcgagtcgggttccgacactgcctccagaaagggctccgataat
ggcaaaaagcaagatcagcgggcgaagaacccttcaactggtggacgtggacctccgcaa
cgtagagggcatcctcctgcttctcaaggcacgcgcaccccgaaggatcaaagccaaaac
aagcagtcatcttcacctgctcctgctcagggcaaagaatccagtgacgcactctcttct
cttcaacgagttattgcagatcttaagacaacatctccagttcaaccccctgcaggatct
aacaaccttgcatcaatgcctggctcgcaaggccatactttacctttgcatgcgcccacc
ttccaaccaggggcaggggcttatcatggaacaaatgtggatcagaagcatcgtaaagcc
gcctccctaggaaactcttcgttgtcgggcaatttcaactcttattctcctcatttagga
gctatgatggaagacgttgaggatggttcggggtcctttgaggaaggtgaaatcccagaa
cgttattatcaggggggtcatcagccacgctctcagtcgcagagttttatggctccacgc
tttgcagcgctagcggcacagcaggagcaagacacagttggtcctactggtcgcccccaa
ttagcaccaggcttcatgttcggtgcacgcaaacgcggcccgcctatgggcccacctatc
aacgaggaagatatcggtttccagttccctcaacagcagcaaaactatcttcctgaggtt
ggacaaaaggaacaaggtcacaggaagaccgaaagcggtgaaattacgggcatcatggcc
gagcagattgcattgcaaaatcagattgaggccctccagcaacaacagcaggctctgtac
caacaacagctcgcctctaatcaagttctatcgttccaaacccccggccttgcaccacat
cgtggcgcccatcggcgtgtccagagtacagtgcctatgagccccagttcaggcgctaca
tttggctctctccaacaccccatgggccaattcggaagcattggtggcttaaatcttggc
ctcgatggtcaaacacaagggattcctaggggtcatggccgacgacatagtgtaaccgtc
gttaacaagaccgtcagtcaaccaaacatggggtctaccgcctttgaaggctttgacgaa
ggctttactcctcctgttcctgcaatgggaggtcactcgaggcaaacatctcgagtcgat
tccagctggcgaattaatggtggtgttggaggcattcagggcaataatggtggatttgcg
actgatcttgcccaagcacaggcacagttgcaaagtttacagcaattcagagctgctgct
gggggtcatcaccataaaatgccttccttcagtttccccaacatgctgcctaacatgatg
gctgccaatatgatgggtattggattgggtgggataaatcttctccaacagcagcaacag
caattccaatctcaactccagcagcagtccaaccaacctcaacgcaaatctttgttcgct
ccctacttgcctcaggcttccttgccacctcttcttgctgctggaaaactggttgttgga
attcttcgagttaataaacgcaaccgctcagatgcctacgttgctactgaagttctggat
gctgacatctacatctgcggttctaaagataggaatcgagctctcgaaggagacatagtt
gccgtagagcttctggacgttgatgaagtttggggtaccaagaaagaaaaggaagagaaa
aagaggaagaaggaagaaaatgccgcatacgacttaaagtccaatactggtcgcaaagat
gacaagaagaaagatgacgtggaagttgagggacaaggccttatgctttttgaggatgaa
gaggtaaccgatgaaattaaaccccaatttgcagggcacgtcgtcgccgttgttgaaaga
atgccaggtcaattattctccgggactttgggccttctccgtccatcttctgctgctact
aaggaaaaacaagaggctgaaagacgcgagcgagagggtgacaaaggtgatgaaccgcgt
cgtcctattgaacgtcctaagattgtgtggtttaagcccaccgataagcgtgtacctctt
attgccatcccaacagaacaagcacctccagactttgttcagaactcagaagcatatgtt
gacaagctcttcgttgcttgtattaaacgtcatcctatcagttctttgcatccttttggg
accttggttgaagaacttggacccattggcgatattgaagttgaaacaagcgcgcttctt
aaggattgtaacttccctacggaggatttcacagacaatgttttgaaatgtcttccgcct
atcccttggactatccctgagcgtgaagttgagactcgtaaagatttgcggggtgaacgc
atctttagcattgatcctgaaacagctaaagacatcgacgacgccctgtcgattaaagca
aacgacgatggaacttttgatgttggtgttcacatagcggacgtttcattctttgtgaag
ccaaacacgccattagatcgggatgcgcgcaagaaagcaacaagtgtttatcttgtgcag
cgcgcagtgcccatgcttcctcctactttaagcgagcaactgtgtagtttgcttcccggc
caagatcgcctcgcattttccgttgtcttcacaatggataatgaagcaagaattaccaaa
aaatggttcggcaaaaccataattcgctctgtggccaaattggcatactctgatgctcaa
aaagtcattgatggtcaacctctaagcgatgtgccaatagatacaggccataatccctct
gatatcgaacgtgatatcatgggcttgcagaatcttgccaagaaacttcgtgcacgtcga
ttcgaaaacggaactttaagtctggaaagcctcaaactttcgttcaccctggatgaaaat
ggccttcctacagattgtggacaatacgagcgcaaagaagccaatacgttgattgaagag
tttatgcttttgaccaatatctctgttgcccaacaaattgctgtgcacttacccgagcaa
gccttgctacggcgccatgatactccgcttgaacgtcgcttgaactctttcaaccaacgt
gcagaacgcttgggatacaccatggacacatcgtctgcgggtgccttgatgaagtctttc
aacgcaattgataatccgactgcccgcagactcttggaacttctgtcattcaaggcaaca
cagcgcgctaaatacttctgctccggcatgcttgatattgcgaaatattggcattatgca
ctgaatacccctctatatactcatttcacgtcccctattaggcgatatgctgacattctt
gttcaccgtcaattggaggcagttttacaaggcggagccgagacaaagtttaccatggac
cgtgatgctgtggcgaaagtcgcacaacagtgcaacattaaacgcgattctgccgtcctt
gctcaggagcagtcagcgcatcttttcctttgtgtcctcatttcagatctcacaaatcga
tatggtcctgtaattcgtcaagcaaaggtcgtcggtgtgctcgatgctgcttttgatgtg
cttgtcccagaatttggtattgagaaacgggttcatgttgatcaaatgccaattgacaac
catgtttatgacgaacacactcacacacttcaaatttattggtccaatcgcgatgttata
tcttggcttgcagagaacagcgacgacgaacatttaagaaaggtgaaacaaaatgctgaa
cagcatgctttgaaaatggaagttgtctctcgttctgtccacgatgagagcgctcttttc
gatgaagatgacgccgacgacgatgagatcgtattgggccgtagtgagaccttacccgag
aagcctgagacctccaagcaacgcctactttccatggccaaagtcaaacccgaatttgaa
ggtgtacgcgtcactgcgtccgggcacaaaatccaggaaattcgtgaactcatgaccgtc
cctgttattgtcaccgcagaccttacgaagagccctcctgtcattaaagtctacagtgtc
aacccttatgctgagcagaagtaa
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integrated database retrieval system
