Psilocybe cubensis (magic mushroom): JR316_0005058
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Entry
JR316_0005058 CDS
T08288
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
JR316_0005058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcub03019
]
JR316_0005058
Messenger RNA biogenesis [BR:
pcub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
JR316_0005058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
GTP_EFTU_D2
Ras
Motif
Other DBs
NCBI-GeneID:
71971379
NCBI-ProteinID:
XP_047750583
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Position
4:complement(2617659..2619684)
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AA seq
530 aa
AA seq
DB search
MAQRSATSSRASTPVGSPAKGPKKAPSVGTSTPLRKASNDQQNLDMAGLNLNENVDVSST
IAEEPPKMILARDKVLEEAKRLLDAESANGKKGISLVVIGHVDAGKSTLMGRLLYELGKL
DEKTRRANERGSDKIGKSSFSWAWGLDGTVEERERGITMDVALQSLETPHRQITILDAPG
HKDFIPNMISGASQADCALLVVDATTGEFESGFQKGGQTREHLLLVRSLGVAQVIVAVNK
LDQVEWSRARYEEICEELRPFLIQSGFQPSKTKFVPVGAVQGINLVGRDKVLGAQLSEWY
KGPTLVDLLDVLVPPARDIISPLRVPISNISKRQNLGASVSGRLCGGVVQVGEKLRVLPG
DETAIVKGIDIEDQSVPWAASGSNVVLHLTAIDPVHLHTGSVLCPPTDLVPLAVVFTARI
IVFDIQVPITAGTSVELYHHSRDVPATTSKLITTIDRATGKAIKSNPRVLTKNTSAEVEI
TLRGTKVSGSTMTTRGIAIEPFAVNKDMGRILIRRGGETIAAGVVLEIIG
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagatctgctactagttcgcgtgcttcgaccccggtgggatctccagccaaa
ggccctaagaaagcaccttctgttggtacctcgacgcctctcagaaaggcttcgaacgat
cagcagaatttggacatggcaggtttgaatttaaatgagaacgttgatgtatcttccact
attgcagaagaaccccctaaaatgatcttggcccgcgataaagttctagaggaagcaaag
aggttgctagatgctgaaagcgctaatgggaaaaaggggattagcctcgtagtcatcggc
catgttgacgccggaaaatctaccctcatgggtcggcttttgtacgagcttggaaagctc
gatgaaaaaacaaggcgggcaaacgaacgaggtagcgacaaaattggaaagagtagcttt
agttgggcgtggggcctcgatggaacagttgaggaacgagaaagaggaataacgatggat
gttgctttgcaatctttagagacgcctcatagacaaatcactattcttgatgccccggga
cataaagattttatcccaaatatgatatcaggagcatcacaggcagattgcgcccttctc
gtagtcgatgccacgaccggcgaatttgaatccggtttccaaaaaggtggacaaactcgt
gaacatctgttgctagtcaggagtctaggcgtggctcaagttattgtagctgtcaataaa
cttgatcaggtcgaatggagcagggctcgctatgaagaaatatgcgaggaactacgtcca
ttcctcatacagtctggttttcagccttcgaaaaccaagtttgtacccgtgggtgctgtc
caaggcataaacttggtcggtcgggacaaagtattaggagcacaattgtccgaatggtat
aaaggacccacactggttgatcttcttgatgtgttagtgcctcctgccagagatattatt
tctccgttgagagtcccgatatcaaatatctcaaagaggcaaaaccttggcgcttctgtc
tcaggcaggctctgcggtggggtcgtccaggtaggcgaaaagttgagagtcttgcccgga
gacgagacagctatagtcaaaggcattgatatcgaagatcagtctgtaccatgggctgca
tctgggtcaaacgttgtactgcacctgactgccatagaccctgtccatcttcatactggc
agtgtcctctgtcctccgacagatcttgtacctttggccgtcgtatttactgccagaatt
attgtattcgatattcaggtcccaatcactgctggaacttccgtggaactctatcatcac
tcgcgcgatgttcctgcaacaacatccaaattaattactactattgaccgcgctactggg
aaagctattaaatccaatcctcgtgtattaaccaagaatacttcggctgaagtcgagatt
accttgcgtggcacaaaagtgtcgggatctacaatgacaacccgtgggatagcaatagag
ccttttgccgtcaataaagatatgggtagaattttgatcagaagaggtggtgaaacaatt
gcggcaggtgttgtcctcgagataatcggatag
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