Psilocybe cubensis (magic mushroom): JR316_0005064
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Entry
JR316_0005064 CDS
T08288
Name
(RefSeq) ATP-dependent RNA helicase DBP8
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcub03009
]
JR316_0005064
Enzymes [BR:
pcub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JR316_0005064
Ribosome biogenesis [BR:
pcub03009
]
Eukaryotic type
90S particles
Helicases
JR316_0005064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
71971385
NCBI-ProteinID:
XP_047750589
LinkDB
All DBs
Position
4:2630552..2632582
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AA seq
567 aa
AA seq
DB search
MPTKLKTKSKTVDDLLRQQEEPPRKKRRLSITESLSGDEDSASTSDDEASSSREINDGNY
LSDSESDDELQKPEAPSQINVEDRLNLFGKRFTSPKRTVAKPSVPPPVSSFASLGISRPL
QSALNSMSIKTPTEVQSACIPVLLAGKDCIGNAKTGSGKTIAFALPILQKLSVDPYGIFA
LVLTPTRELAFQIAEQFAVLGSSLNVRTSVIVGGMDMMAQALELGNRPHVVIATPGRLVD
HLRSSSGEWDLSRVKFLVLDEADRLLTETFSSDLGYLFNVLPKERQTCLFTATLTPSIET
LAEAPPRPGKQKPFIHRMKATVETVSTLKQHYILVPSHVRESYLFYLLCNPPESTLHMRR
APPEPTKKKSNPVKSKAKKAKVDNADDELEQPPPTIIFCAKPKTAAYLTLLLKTLNIRST
ALHSRLTQRERLSSLSLFRASVVPVLVSTDVGARGLDIEEVAMVINWDLPSEPEEYTHRV
GRTARAGRGGIAISFVTERDEERVLKIEDRIKTKLEEMTLPEDKVLDKLNAVSTAKRLAN
MELHDSNFGKREEIHKMKYGTRREGEK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcctactaagcttaaaacaaagtcgaaaactgtggatgatctgttgcgtcaacaagaa
gagcctccaagaaagaaaaggcggctttctattacggaatctctatctggggacgaagat
tccgcttccacctctgacgacgaagcaagctctagcagagaaataaacgacgggaattac
ctttcagattcagaaagtgacgatgagctgcaaaaaccagaggcaccttcacaaatcaat
gtcgaggatcgtctgaatctattcggaaaacgcttcacatctcccaaacgcaccgtcgca
aaaccttccgtacctccccccgtgtcgtctttcgcgtccctaggaatatccagaccacta
caaagtgcactgaacagcatgtctatcaaaacacctacagaagtccagtcggcttgtata
cccgttctcttggctggcaaagattgtataggtaacgcaaagacaggttcaggcaaaacc
atcgcttttgctttgccgatcctacaaaaactttcagtggatccttatggcatatttgca
ttagtgttgactcctacaagggaacttgcattccagattgcggaacagtttgccgttctt
gggtcttcgctgaatgttaggacctcagtcattgttggagggatggacatgatggctcag
gcgctggaactcggtaatcgccctcatgtcgtcattgcgacgcctggtcggttggtcgac
catctgcgaagctcaagtggcgagtgggatctctcaagagtgaaatttttggtacttgac
gaagcggatagactattaacggagacgttctcttcagacttggggtatctgttcaacgtg
ctaccgaaagaaagacaaacgtgtctattcaccgcaacgcttacaccgtctattgaaacc
ttggctgaagcgccgcccagacccgggaagcagaagccttttattcaccgaatgaaggcg
acagttgaaacagtatcgactttgaagcagcactacatcttggttccttcacatgttaga
gaatcatatctcttttaccttttatgcaaccccccagaatctactctgcacatgcgacgc
gcgcccccagaaccgacgaaaaagaaatccaatcctgtaaagtcgaaagcgaaaaaggca
aaggtcgacaatgcagacgatgagctggaacaaccgccgccaacgatcatcttttgcgcc
aagcccaagacggctgcgtatcttacccttttgttgaagacgctgaatatccgtagtaca
gcgttgcactcgaggctgacccaacgtgagcgattgtcatcgttgtcgctgttccgagcg
tcggtggttcctgtgctggtctctactgatgtcggagcgcgtgggttggatatcgaggag
gttgctatggtcatcaattgggatctgcccagtgagccggaggagtatacacatcgtgtg
ggacgaactgcgcgtgctggaaggggaggtatcgccatcagttttgtgactgagcgcgac
gaggagcgtgttttgaaaattgaggaccggatcaaaacgaaactggaagaaatgacgctg
cccgaagacaaggtgctggacaagctgaacgcggtgtcgacagcgaaacggctggcgaac
atggaactgcacgactctaattttggcaagagagaggagattcacaagatgaaatatggg
acgcgcagagagggggaaaagtag
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