Psilocybe cubensis (magic mushroom): JR316_0005123
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Entry
JR316_0005123 CDS
T08288
Name
(RefSeq) Transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
JR316_0005123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcub03021
]
JR316_0005123
03019 Messenger RNA biogenesis [BR:
pcub03019
]
JR316_0005123
Transcription machinery [BR:
pcub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
JR316_0005123
RNA polymerase I system
JR316_0005123
Messenger RNA biogenesis [BR:
pcub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
JR316_0005123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
71971444
NCBI-ProteinID:
XP_047750648
LinkDB
All DBs
Position
4:complement(2788707..2789180)
Genome browser
AA seq
118 aa
AA seq
DB search
MQAAIPPQARSKSLRACLLCSVIQLPGDFRKHGCPNCEEILQMKGAPDRISSCTTTQFDG
IIAVIDPDNSWVARWQRTAKYVRGMYAVRVSGRIPEDVEMELERRNIKYRPRDQSDQD
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcagccatacccccacaagcgcgctcaaaatctctccgcgcatgtctcctctgc
tccgtcatccagctccccggtgatttcagaaaacacggctgtccaaactgcgaagagatc
ctccagatgaaaggcgctccagatcgtatctcatcatgcacaactacccagttcgacggt
atcatcgcagtgatagacccagataacagctgggtggcgcggtggcagcgcacagccaaa
tacgttcggggaatgtacgcagtccgcgtgtcaggtcgtataccagaggacgtagaaatg
gaactcgaacgaagaaacatcaagtaccgcccacgagaccagagcgaccaggattga
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