KEGG   Psilocybe cubensis (magic mushroom): JR316_0005944
Entry
JR316_0005944     CDS       T08288                                 
Name
(RefSeq) Putative 26S proteasome complex subunit sem-1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
pcub  Psilocybe cubensis (magic mushroom)
Pathway
pcub03050  Proteasome
pcub03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcub00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    JR316_0005944
  09124 Replication and repair
   03440 Homologous recombination
    JR316_0005944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcub03019]
    JR316_0005944
   04131 Membrane trafficking [BR:pcub04131]
    JR316_0005944
   03051 Proteasome [BR:pcub03051]
    JR316_0005944
   03400 DNA repair and recombination proteins [BR:pcub03400]
    JR316_0005944
Messenger RNA biogenesis [BR:pcub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     JR316_0005944
Membrane trafficking [BR:pcub04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    JR316_0005944
Proteasome [BR:pcub03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     JR316_0005944
DNA repair and recombination proteins [BR:pcub03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     JR316_0005944
SSDB
Motif
Pfam: DSS1_SEM1 RNase_H2_suC
Other DBs
NCBI-GeneID: 71972265
NCBI-ProteinID: XP_047749043
LinkDB
Position
5:complement(1471497..1471874)
AA seq 101 aa
MSPSESNSKAAESSKLEEKPKEAQQPNLSVLEEDDEFEEFPVSDWDDSKTDLAHLGGAAP
GAAKSGGDKLWEDNWDDDDVEDDFSVQLRHVARWFHNSNFI
NT seq 306 nt   +upstreamnt  +downstreamnt
atgtcaccatcagaatcaaattctaaagccgctgagtcctctaaattagaggagaaacca
aaggaggctcaacaacccaacctaagcgtcttggaggaagacgacgagttcgaggaattc
cctgtgtctgactgggatgactcaaaaacagatctggcgcaccttggcggggctgctccg
ggcgctgcgaaatcagggggagataaattatgggaagataactgggatgacgatgatgtg
gaagatgatttcagtgttcagctaaggcatgtcgcgcgttggtttcacaacagcaatttt
atctaa

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