Psilocybe cubensis (magic mushroom): JR316_0006002
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Entry
JR316_0006002 CDS
T08288
Name
(RefSeq) ATP-dependent RNA helicase dbp6
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcub03009
]
JR316_0006002
Enzymes [BR:
pcub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JR316_0006002
Ribosome biogenesis [BR:
pcub03009
]
Eukaryotic type
Pre-60S particles
Helicases
JR316_0006002
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
71972323
NCBI-ProteinID:
XP_047749100
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All DBs
Position
5:complement(<1628038..>1630599)
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AA seq
667 aa
AA seq
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MSGTASANVAPITKEKTKSKQRYLKRKKERRKIRTKSSLKSKGDDKDESEDEEMEDAPKS
ISLTLPEERNGLIQEKTLQRSKKRSREEDQEDEDVLMATEERDISPSRRSQSPELVSALP
SFPLPALPNAPSKSDLALQGLDQALIGAEWVSPTTVLPIPIGKDDGGTRLSERTRMRLRD
IGITELFAVQTALLPFLLPSQQHSLYLPYSPPRDVCVSAPTGSGKTLAYVLPIIETLSSR
VVTRLRALIVLPTRDLVAQVRETIEVLSKGTKLKVGTATGQHSFAHEQSQLVQDKNIDLL
GGSSKVDILICTPGRLIDHLVGTPNFSLQHLRFLVVDEADRLLAQSFQGWLAQVLAATRV
RPTTLVAQQPQSESEQNVMVPQLHPLDSLLPDGLSPTVLGNLTSYSMPSFFTEHRSTSCQ
KLLFSATLTRDPGKISTLELRNPKYFIVQGSDANHTESNLLDVVTEKFSMPATLNEHMIV
SDPSEKPLVFFHLVHTQNITNALVFTKSTESTIRLVRLFEFFEAKRTDNESSAPLVLRAY
SSDLPSQERKSILEQFKEQKINILVCSDLISRGIDISHVSHVVSYDVPVDMRKYVHRVGR
TARAGRTGDAWTLVEQQEARYFKQMLKNAGHLELVKRVRINAKDLAPLLPHYEAALNNLK
EVYTRQS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaacagctagtgccaatgtcgcaccaatcaccaaagagaaaacaaaatcgaag
caaaggtatctgaagcgcaagaaagaacggagaaagatcagaacaaaatcatctctcaaa
agtaaaggtgacgataaagacgaatccgaagatgaagaaatggaagatgcacctaagagc
atttctttaactctgccagaagaaaggaacggtctaatccaagaaaaaacccttcagcgg
tcgaaaaaacgttcacgagaggaagatcaggaagatgaagatgttttaatggcaacggag
gaacgagatatttctcctagccgcagaagccaatcgccagagctagtctcggctttacct
tcatttcccctacctgcgctaccgaatgcaccctcaaaatccgacctcgctcttcaagga
ttagaccaggcattgatcggtgctgaatgggtctcaccaaccactgtgttgcccataccc
atcgggaaggacgatggaggcacgcgcctctctgaacgaacgaggatgcggctgagagac
attggcatcaccgagttatttgctgtgcaaacggcccttctaccctttctgctaccgtcg
cagcaacacagtttgtatcttccctacagtcctcctcgagatgtctgcgtatctgcgccc
actgggagcggtaagactttggcatacgtattacctatcatcgagaccctttcttcccga
gttgttactcgtttacgagctttgattgtgttacctacacgcgacctggtggctcaggta
agggagacaattgaggttctgagtaaaggaactaaattgaaagttggaactgccactggt
cagcattcttttgcccatgagcaatcccaactagttcaagataaaaatatcgatttgttg
ggtggatcaagcaaagttgatatcttgatttgcacccctggaagactgatagatcaccta
gttggaacgccaaatttttccttgcaacatcttcgatttttggttgttgatgaggccgac
aggttacttgcacaatcatttcaaggctggcttgctcaagttctggcagcgactcgcgta
cggcctaccacattggtcgcccaacaaccacaatccgaatccgaacaaaatgtaatggtc
ccgcaattacacccgttggattctttacttccagatggtctctctcccacagttttgggt
aatcttacatcatattctatgccgtccttcttcaccgaacatagatcaacatcctgccaa
aaactactcttttctgcaacgcttactcgagatccgggaaaaatatccacattggaattg
agaaaccctaaatattttatcgtacaaggaagtgacgcgaatcatacggagtcgaactta
ttggacgtcgttaccgagaaattctcaatgcccgcgaccctaaatgaacatatgattgtt
tccgacccttcagaaaaaccactagtctttttccaccttgttcacacgcaaaatatcacc
aacgctctcgtcttcaccaaatctactgaatccaccatccgtctcgtacgccttttcgaa
tttttcgaggccaagcgaacagataatgaatcttcagcacctcttgttctgcgcgcttat
tcgagtgatctgccgagccaggaacgaaagtctatacttgaacagttcaaggaacagaaa
attaacatacttgtgtgttctgacttgatatcccgtgggatagatatcagtcatgtatct
cacgtcgtcagttacgatgtgcctgtagacatgcgcaagtacgtgcaccgcgtcgggagg
acggcgcgtgctgggagaacaggagatgcttggactttagttgaacagcaggaggcgcgg
tatttcaagcagatgctgaagaatgcaggtcacttggaattggtcaaaagggtcaggatc
aacgcgaaagatttggccccgcttttgccgcattatgaagccgctctcaacaacctgaaa
gaggtgtatacacgccagagctag
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