Psilocybe cubensis (magic mushroom): JR316_0006051
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Entry
JR316_0006051 CDS
T08288
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JR316_0006051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcub03041
]
JR316_0006051
03009 Ribosome biogenesis [BR:
pcub03009
]
JR316_0006051
Enzymes [BR:
pcub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JR316_0006051
Spliceosome [BR:
pcub03041
]
Complex A
U1 snRNP components
U1 related factors
JR316_0006051
Complex B
JR316_0006051
Ribosome biogenesis [BR:
pcub03009
]
Eukaryotic type
Pre-60S particles
Helicases
JR316_0006051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
UTP25
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
71972372
NCBI-ProteinID:
XP_047749149
LinkDB
All DBs
Position
5:complement(1763325..1765955)
Genome browser
AA seq
496 aa
AA seq
DB search
MSYGGYHGGGGYGGGGGYGGGGGGGGWGGGYDDKMSNLGGGLRSVDWQSTKLTHFEKNFY
IEDPRVTARSEQEINEFKRAKEMKVQGRNVPRPVTSFDEVGFPEYLMTSIRAQGFDAPTP
IQCQAWPMALSGRDVVAISQTGSGKTISFALPAMLHINAQPLLAPGDGPIALVLAPTREL
AVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLETQKTNL
RRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWPKDVQKLANDFLKDMIQ
VNIGSTELTANHNIQQIVEVVSDFEKRNKLIKHLDQISAENAKVLIFVATKRVADDITKY
LRQDGWPALAIHGDKEQRERDWVLGEFKAGRSPILIATDVASRGLDVKDVGYVINYDFPN
NCEDYIHRIGRTGRAGMKGISYTYFTTDNSKSARELISILREAKAVVPPQLEEMASYGGG
GGGRGMHFFPLIHPLQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggtggatatcatggtggaggaggatatggtggaggcggtggatatggaggt
ggaggtggaggtggaggctggggtggtggttacgacgacaagatgtccaacctcggcggc
gggctgcgctcagtggattggcagagcaccaagttgacacatttcgagaaaaacttctat
atagaagatccacgggttacagctcgcagcgagcaagagatcaatgaatttaaacgtgcc
aaagaaatgaaggttcaaggccgcaacgttcctaggccagtgacctcttttgacgaggtt
ggattcccggaataccttatgacctccatccgcgcacaagggttcgatgcgcctactcca
atccaatgtcaagcttggccaatggcactcagtggccgagacgtcgtcgctatatcccaa
acgggctctggaaagacaatatccttcgcccttccggccatgttacacatcaatgctcag
ccattgcttgcccccggggatggtcctatagctcttgttcttgcaccaaccagagagttg
gcagtgcaaatccagcaagagtgcacaaaattcggatctaactcccgtatcagaaacacc
gctatctacggtggagcacccaagggacctcagattcgtgaccttcagcgcggtgtcgag
attgtcattgccactccaggtcgcctcattgatatgctggagacccaaaagaccaatcta
aggcgtgttacttacttggtcatggacgaggctgaccgcatgctggacatgggtttcgag
cctcaaattcgtaaaattgtcagccagatccgtccagatcgtcagactctcatgttcagt
gctacatggccaaaagacgtccaaaagcttgccaacgacttcctcaaggatatgatccag
gtcaacattggttctacagagctgactgccaatcataacatccagcaaattgtcgaggtc
gtcagtgatttcgaaaagcgtaacaagctaatcaagcaccttgatcaaattagcgcggaa
aacgccaaagttcttatctttgtcgcgaccaaacgtgttgcggacgatatcacgaagtat
ctgcgtcaagatggatggccagcacttgccattcatggagacaaagaacagcgggaacga
gattgggttcttggtgaattcaaagcaggccgatcccccatactcattgccacagatgtt
gcttctcgtggtcttgatgtgaaggatgtaggatatgtgatcaactatgacttccctaac
aactgcgaagattatatacatcgcattggtcgtactggccgtgcaggcatgaagggcatc
tcatatacttacttcacgacagacaactccaagagtgctagagaattgatcagcatcctt
agagaagcaaaagccgttgtgccccctcaactagaagaaatggcttcatatggcggtggt
gggggtggacgtggtatgcatttcttccctcttatccatcccttgcaatga
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