Psilocybe cubensis (magic mushroom): JR316_0006170
Help
Entry
JR316_0006170 CDS
T08288
Name
(RefSeq) Branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JR316_0006170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcub03041
]
JR316_0006170
Spliceosome [BR:
pcub03041
]
Complex A
Other components
Complex A specific factors
JR316_0006170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
zf-CCHC_3
KH_1
zf-CCHC_4
zf-CCHC_6
DnaJ_CXXCXGXG
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
71972491
NCBI-ProteinID:
XP_047749268
LinkDB
All DBs
Position
5:complement(<2223145..>2224989)
Genome browser
AA seq
494 aa
AA seq
DB search
MWKPATRQITGTNDVPLGSRRRFGPAPVDDAPAPQLAQPSPSVYPRSHNQDESPGKRGRD
ESPVNGDPKVDPNAPRKRRSRWGDAKTEIPGLPTAISAAGVSQAQLDNYAIHLRLEEINR
KLRLNDFIPPERERSASPPPTYDAHGRRTNTREVRYRKKLEDERIKLVDRAMKNDPNFRP
PVEYHQQKRSQRPSDKVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSV
KEGKARPDQYADDAEEDLHCLVLGDTEEKVAACVKMINKVIETAASTPEGQNDHKRNQLR
ELAALNGTLRDDENQICQNCGGVGHRKYDCPEQRNFTANIICRVCGSAGHMARDCTVNKD
PNAQAVSINGPSQALSRTGFDSEYASLMAELGENAGPGDPGKTPWDAPSMGHDITAGGSN
IPPWRRPESWIQPANNQQNQGFRPPQAYAGGYTGAPGGYGGAAGGQWAGYAAGGYQQPQD
YANYAPYYQGQYAQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaccagccacccgccaaataactggaacaaatgatgttcccctcggttctcga
cgtcggtttggccctgcacccgtcgacgatgcgccggctcctcagctggctcaaccttcc
ccttcagtgtatcctagatcccacaatcaggatgaaagtcccggaaagcggggaagagac
gagtcgccagtaaacggtgatcctaaagttgaccccaatgctcctcgaaagcggcgcagt
cgctggggtgatgccaaaaccgaaattcccggccttcccactgccatttctgccgctggt
gtatctcaggcacagcttgacaactacgccatccatcttcgattggaggaaatcaatcgc
aaacttaggttgaatgactttattccgcctgagcgggaaaggtcagcctcccctccccca
acctatgatgcccatggtcgaaggactaacactcgcgaagtccgttaccgcaaaaagttg
gaagatgaacgtatcaagcttgttgaccgtgctatgaaaaacgaccccaacttccgcccg
cctgtcgagtatcaccagcaaaaacgttcgcagcgcccttctgacaaagtttatatccct
gtcaaagagttcccagagatcaatttctttggtttgcttgttggacctcgtggtaatagt
ttgaagaagatggaacgtgagagtggtgccaagatcagcattcgcgggaaaggcagtgtg
aaagaaggaaaggcccgtcctgaccaatatgctgacgatgcagaggaagatcttcactgt
cttgtcctcggtgacaccgaagagaaagtcgcggcttgtgtcaagatgatcaacaaggtt
atagaaactgctgcctctacacctgaaggccagaatgatcacaaacgcaaccagttgcga
gagctagctgcccttaacggcactcttcgcgatgatgagaatcaaatttgtcaaaattgc
ggtggagttggccatcgcaaatacgattgtcctgaacagcgaaactttacagctaacatc
atttgtcgtgtctgcggaagtgctggccatatggctcgtgattgtactgtcaacaaagat
cctaacgcccaggctgtttctatcaatggaccctcacaagctcttagcaggactggattt
gattctgaatatgccagtttgatggctgaattaggcgaaaacgcaggacctggagatccc
ggcaagacaccttgggacgcccccagcatgggtcacgatatcactgctggtggttccaac
attcccccttggcgtagaccagaatcttggattcaacctgctaacaatcagcaaaatcaa
ggtttccgcccgcctcaggcatatgcaggagggtataccggtgctcctggaggttatggg
ggagcggctggtgggcagtgggctggttatgcggcaggtggctatcagcaacctcaagat
tacgccaactatgccccgtactatcaaggccaatatgctcagtaa
DBGET
integrated database retrieval system