KEGG   Psilocybe cubensis (magic mushroom): JR316_0006180
Entry
JR316_0006180     CDS       T08288                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
pcub  Psilocybe cubensis (magic mushroom)
Pathway
pcub03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pcub00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    JR316_0006180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcub03019]
    JR316_0006180
   03036 Chromosome and associated proteins [BR:pcub03036]
    JR316_0006180
Messenger RNA biogenesis [BR:pcub03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     JR316_0006180
Chromosome and associated proteins [BR:pcub03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     JR316_0006180
    COMPASS/SET1 complex (yeast)
     JR316_0006180
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 71972501
NCBI-ProteinID: XP_047749278
LinkDB
Position
5:2260588..2262019
AA seq 423 aa
MPPHPSSSSASHPPVTLTLHNGLMAKLKPSKIFKTAVEPAPKPPSPVGPGQHQKAAPPAR
SVTGICFDDRGDQLITAGEDETFKLYSCKSGKLTKTFYSKKYGVDLPRFTHKNTAILHAS
TKEDDTIRYHSLHDNKYLQYFRGHKARVVSLEVSPIDDGFMSGSMDNTVRLWDLRTPNCR
GLLTLPNNSVVAYDSSGMVFAVAVNEYSRILLYDTANYDKAPFITILLEDPALALKSYPP
RPICMTSLSFSTNGKYLLVGCSSDTHYILDAFDGFLIAKLEGHIGLERTRINAQLDIKPS
KGISGEEVSWTPDSKYVIGGSLDGRIFIWDITNLPPRPDPEPTIPSRPDTILSSRAEAER
KKFPVRLNPIVALDAHPGPSRCVKFNPRLAMMASAGTELAFWLPDTSGDAEEAAKDLLKK
RTA
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgcccccccacccaagttcgagcagtgcgagccaccctccggtcacactcactcttcac
aatgggcttatggcgaagctcaaaccgtccaaaattttcaaaacggcagtcgaaccagcc
cccaaaccaccatcaccagtaggtcccggtcaacatcaaaaagcagccccacctgcacga
agcgtaacagggatatgcttcgacgacagaggcgatcaactaattacagctggtgaagat
gaaaccttcaagctgtacagttgtaagtcgggcaaactcacaaaaacgttctattcgaag
aaatatggcgtcgatctgccacgtttcacccacaaaaacactgccattcttcatgcatca
acgaaagaagatgatacgattcgctaccattctctccacgacaataaataccttcaatat
tttcgtggtcacaaagccagggttgtctcccttgaagtttcaccgatagatgatgggttc
atgtcagggtccatggacaacactgtccgtctctgggacctccgaacccccaactgtcga
ggtctattgacccttcctaacaattccgttgtggcatacgattcttctggaatggttttt
gctgtcgccgtgaatgaatattctcgaatacttctatatgacacggcaaactacgacaag
gccccttttatcactatccttcttgaagatcctgctttggctctcaaaagttaccctccc
cgtccgatctgtatgacatctctgtcattttcgacgaatggaaaatatctccttgttggg
tgctcaagcgatacgcattacatactagacgcgtttgacgggtttctgattgcaaagctg
gagggacatataggtttagaacgaacaaggattaatgcgcagttggacatcaaaccgtcc
aaaggtatcagcggggaagaagtcagttggaccccggatagcaagtatgttattggcggg
agtctcgatggaagaatcttcatatgggatatcacaaatttgcctccccgccccgacccc
gaacccactataccatctcgacctgataccattttgtcgtctcgagcagaagccgagcgc
aaaaaatttcctgtgcggttgaatcccattgttgccttggatgctcatccgggaccatca
cggtgcgtcaagttcaacccacggcttgcaatgatggctagtgcgggaacagaattggcc
ttctggcttcctgatacttccggggatgcagaagaggctgcaaaggatctgctcaagaaa
agaactgcttga

DBGET integrated database retrieval system