Psilocybe cubensis (magic mushroom): JR316_0006827
Help
Entry
JR316_0006827 CDS
T08288
Name
(RefSeq) chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JR316_0006827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcub03019
]
JR316_0006827
03110 Chaperones and folding catalysts [BR:
pcub03110
]
JR316_0006827
03029 Mitochondrial biogenesis [BR:
pcub03029
]
JR316_0006827
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcub04147
]
JR316_0006827
Enzymes [BR:
pcub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JR316_0006827
Messenger RNA biogenesis [BR:
pcub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JR316_0006827
Chaperones and folding catalysts [BR:
pcub03110
]
Heat shock proteins
HSP60 / Chaperonin
JR316_0006827
Mitochondrial biogenesis [BR:
pcub03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JR316_0006827
Exosome [BR:
pcub04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JR316_0006827
Exosomal proteins of other body fluids (saliva and urine)
JR316_0006827
Exosomal proteins of breast cancer cells
JR316_0006827
Exosomal proteins of colorectal cancer cells
JR316_0006827
Exosomal proteins of bladder cancer cells
JR316_0006827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Rubella_E2
Motif
Other DBs
NCBI-GeneID:
71973148
NCBI-ProteinID:
XP_047747854
LinkDB
All DBs
Position
6:complement(1035687..1037229)
Genome browser
AA seq
435 aa
AA seq
DB search
MNTRTLPPCISVGRGLWWLEKSKQSGRDLLAAGLQVIQVKTGDGTTTATVLARAIYSEGV
KNIAAGCNPMDLRRGSQAAVDRVVSFLSAHAKTITTTAEIAQVATISANGDAYVGGLIVQ
AMEKVGKEGVITVKEGKTIEDKIEITEGYPPCPRGHGAGQTPTDFIIVEDVDGEALAACI
LNKLRGQLQVCAVKAPGFGDNRKSILGDLAILTGGTVFTDELDVKLERASAEMLGSTGSI
TVTKDDMIILNGEGAKDQIAAWCEQIRALIADPTTGNFDRSKLQERLAKLSGGVVVIKVG
GASKVEVGKKKDRYNDALNATRAAVEEGILPGGGVALLKVSLQLATASALAARRGGKQGQ
VLMLLLLPMPMPLPLLPRAEADVMKPVDESVLLGEDALVTEEVHKQHSHAQQGYQHPILG
APHWSAGRKENVHAH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacgtaccttgcccccatgtatatccgtgggcagaggattgtggtggttagaa
aaaagcaaacaaagtggacgtgatttgcttgcagcgggacttcaagtgatccaagtcaaa
accggagacggcacgacaaccgccactgttcttgcgcgtgccatctactcagaaggtgtc
aagaacattgcagctggatgcaaccccatggacctgcgccgtgggtctcaggccgccgtc
gaccgtgtcgtctctttcctctctgcacacgccaaaactatcacgacaaccgccgaaatc
gcacaggtagctactatttccgcaaacggtgacgcctacgttggaggattaattgttcag
gcaatggagaaggtcggaaaggagggtgtgatcactgtgaaggagggaaagacgattgag
gacaaaattgagatcaccgagggatatcctccctgccctcgaggccacggcgcaggccag
acgcccactgacttcatcattgtggaagacgtcgacggcgaggctcttgctgcctgcatc
ctcaacaagctccgtggtcagctgcaggtgtgcgctgtcaaggctcctgggtttggagac
aatcgcaagagcatcctcggtgaccttgctattctcaccggaggaacagtgttcacagac
gagctcgacgtcaagctcgagcgtgcgtcagcggagatgctcggttcgactggaagcatc
actgtcaccaaggacgacatgatcattctcaacggtgaaggtgcaaaggatcagattgct
gcatggtgcgagcagatccgtgccttgattgcggaccccacgacgggcaactttgaccgc
agcaagcttcaagaacgtctcgcgaagctgagcggaggtgtagttgtcatcaaggtgggc
ggagcatccaaggtcgaggttggcaagaagaaggacaggtacaacgacgcgctcaacgcg
acacgcgccgctgtcgaggagggtatcctccccggaggcggtgttgcgctcctcaaggtg
tcgttgcagctcgcgacggcgagtgcccttgctgcccggagaggcggcaaacagggtcaa
gtgctaatgctactgctgctgccaatgccaatgccgctgccgctgctgcctcgagcagag
gcagatgtgatgaagcctgtggatgagagtgtgttgctcggagaggatgcgctggtcaca
gaggaggtgcacaagcagcattctcatgcacagcaggggtatcagcaccccatcctcggc
gcgccgcactggtctgcgggcaggaaggagaacgtgcacgcacactag
DBGET
integrated database retrieval system
