Psilocybe cubensis (magic mushroom): JR316_0006842
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Entry
JR316_0006842 CDS
T08288
Name
(RefSeq) Protein VTS1
KO
K27407
RNA-binding protein VTS1
Organism
pcub
Psilocybe cubensis (magic mushroom)
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcub03019
]
JR316_0006842
04131 Membrane trafficking [BR:
pcub04131
]
JR316_0006842
Messenger RNA biogenesis [BR:
pcub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
JR316_0006842
Membrane trafficking [BR:
pcub04131
]
SNARE
SNARE associated proteins
Others
JR316_0006842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
Motif
Other DBs
NCBI-GeneID:
71973163
NCBI-ProteinID:
XP_047747869
LinkDB
All DBs
Position
6:complement(1082201..1084639)
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AA seq
748 aa
AA seq
DB search
MSLRPPSTSPSPSPGPHENGKVSARQSMGPSSRGTPTLAPASPRPGGQSSARPTSELLGS
GGAMFQTPEAEALDAWFENLQNYEATLEEMAAASLDVNFKEELSAIEQWFKVLSEAERTA
ALYSLLQHSTQVQIRFFITVLQQMARSDPMTALLSPAMGGSMQSQMEAKLASIKSPGLKS
GLPASPTARSFNASATSASAANTPGNRQSLALDGSGSNFLSPDSAAALSTPTTASNANAG
TGNDAAAKLAQQREKLRASNAAHRISAPVLSSPGGLGVDGRASWGPSTLLSQVSEQLANT
SLDGGNGGSGTASRPKSVEIIGTPARASAVGNASANNSNNNNTSNGNSTPGNSNEATAPA
PATVANDSWASMVTTPLVPMFKKEPPKPSADTPTSNNNNGGKGEWHGNAAPGVPRMGDPT
IYKRGAKNGAGAGAGGEVYDDNGNPVGARRGGWSNGRSPGLNSNNNNSGNSASNRFGGNN
NDGGSDTGSNSMNGLGFNALGSPTMGMGVGVGMPGLGVGVGMQPMSPFNMNMLSMMNMSP
EAQMLAAQMAASGFMGQGMGMNQGMGMGGMGGGMGVGGMGMGQPGWMGMSPMSAGIMSAG
LGSAGVGGPGRGGMKGPSSARSTSGGGGGGLRSASSIGGRSSSGAHNHSSADGPSSATPK
SEEDVDPALLNDVAAWLRSLRLHKYTPNFEGCRWQDMVVMDEGALEAKGVAALGARRKML
KTFEIVRRKMGMEGGGGAPPMSAGAGGA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcgtccgccttctaccagcccgagccccagccccgggccccacgagaacggc
aaggtcagtgcccgccaatccatgggcccctcttctcgcggcacacccaccctcgcaccc
gcctcgccccgcccgggcggccagtccagcgcacgcccaaccagcgagctcctgggctcc
ggcggcgccatgttccaaacccccgaagccgaggcgctggatgcgtggtttgaaaatctt
caaaactacgaagcgacgctcgaggaaatggccgccgcctccctcgacgtcaacttcaaa
gaggaactcagcgccatcgagcaatggttcaaagtcctctccgaagcagagcgcacagcc
gctctctacagtctcctccaacactccacccaggtccaaatccgcttcttcatcacagtc
ctgcagcagatggccaggtcagacccgatgaccgccctgctcagccccgccatgggtggc
tcgatgcaaagccagatggaggccaagctcgcgagcatcaagtctccgggcctcaaatcg
ggcctccctgcctcgcccaccgcgcgctctttcaatgcgtctgctacgtcggcctcggcg
gctaacaccccaggcaaccgccagtccctcgcgctcgacggaagcggcagcaacttcctc
tccccggactcggccgccgcgctgtccaccccaaccaccgcttccaacgccaacgctggg
acgggcaacgatgctgcggcaaaacttgcacagcagcgcgaaaagctgcgcgcgagcaac
gccgcgcatcgtatttcggcgcctgtcctctcttcgccgggtggactgggcgtggatggc
cgggcatcgtgggggccctcgacgctgctcagccaggtgtccgagcagctcgccaacacg
tcgcttgacggcggtaatggaggcagcgggacggcgtcccgccccaagagcgtcgagatt
atcggtacacccgcgcgcgcgtccgctgtgggtaatgcctctgcgaacaacagcaataac
aacaatactagtaatggtaattccaccccggggaatagtaatgaggcgacggcgcctgcg
cctgcgactgttgcgaatgatagttgggcgagtatggtgacgacgccgcttgtgccgatg
ttcaagaaggagcctccgaaacccagcgccgacacccccacatccaacaacaacaacggt
ggcaaaggagagtggcatgggaatgcggcgcctggtgtgccccgtatgggcgacccgacg
atatacaagcgcggggcgaagaatggtgcgggggcgggtgctggaggggaggtgtatgat
gataatggaaaccctgtcggtgcgcgccgtgggggatggagcaacgggcggagcccgggg
cttaacagcaacaacaacaattcgggaaatagcgcgtcgaacaggttcggcggtaacaac
aacgacggtggctcggacactggctctaattcgatgaatgggctagggttcaacgcgctc
gggtcgcctacgatgggtatgggcgtcggtgtggggatgcccgggctgggcgtgggcgtg
ggtatgcagcccatgtcgccgtttaatatgaacatgctgagcatgatgaatatgagcccc
gaggcgcagatgctcgcggcgcagatggctgctagtgggtttatggggcaggggatgggg
atgaatcaggggatggggatgggcgggatgggtgggggtatgggtgtaggggggatggga
atggggcagcccgggtggatgggcatgtcgcctatgagtgcggggattatgagtgctgga
cttggaagtgctggtgtgggcggtccagggcgcggcgggatgaaagggccttcttccgcg
cgttccaccagcggcggcggcggcggcgggcttcgctcagcctcatccatcggcgggcgc
tcctcctccggcgcacacaaccactcctccgcggacggcccatcctccgcgacccccaaa
tccgaagaagacgtcgaccccgcgctgctcaacgacgtcgcggcgtggctgcgctcgttg
cggttgcataaatacacgccgaattttgaggggtgtcggtggcaggatatggtggtgatg
gatgagggcgcgttggaggcgaagggtgttgcggcgcttggggcgaggaggaagatgttg
aagacttttgagattgtgaggaggaagatggggatggaggggggtgggggggcgccgccg
atgagtgcgggtgcggggggtgcgtga
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