Psilocybe cubensis (magic mushroom): JR316_0007167
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Entry
JR316_0007167 CDS
T08288
Name
(RefSeq) Ribosome assembly protein 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JR316_0007167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcub03009
]
JR316_0007167
Ribosome biogenesis [BR:
pcub03009
]
Eukaryotic type
Pre-60S particles
GTPases
JR316_0007167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
71973488
NCBI-ProteinID:
XP_047748192
LinkDB
All DBs
Position
6:<2108038..>2111785
Genome browser
AA seq
1059 aa
AA seq
DB search
MEVPDAANVRIITTLGHVDHGKTTLMDALLAANNIISPRMAGKMRYLDSREDEQERGITM
ESSAVSLKFQVMERSTDGGIKPRTYVVNMIDTPGHVDFSSEVSTASRLCDGALVLVDVVE
GVCTQTVAVLRQAWHDRLRPILVINKFDRLITELKLSPIEAYHHLARLIEQVNVVMGNFF
ASERMEDDQRWHEERERRLAEKKDAIADEADATVNDTEEFQEKDDEDIYFAPEKGNVIFA
SALDGWGFRVGKFAQLYAKKLGIKEANLRRVLWGDFFLDPKTKRVISYKHLRGRALKPLF
VQFVLDNIWAIYDAVVVNPNPDKVAKIVTTLELKIPPRDLKSKDTRHLLSLICTQWLSLS
TCIIQAAIDIVPTPPVAQATRIPKMLYPYLYEATLQPRNKLEEDLFTSKSGSKACVVAYV
SKMFAVSSKDLPENKKKPLTAEEMRERAREARAARSAEAKEEQKPTPQENIPISEAKQLE
VEEDSKKTDGEVVLGFARLYSGTIRVDTSVYALLPKYNTELAPTHPNNVRYLLTAKVESL
YVMMGRELVPVTEVHAGNIFAIKGLESKVWRSATLCSPDDAGIVDGRASEDKDCLINLGA
VNRSAAPIVRVALEPERPADMPKLINGLKLLSQSDPCVETFQQQTGEHVILTAGELHLER
CLKDLRERFAKVEIQASKPIVPFRETAVKASDMAPTKTPNAPRGTIRGTSSQKVVSFTIR
ASPLPPTIMDFILENLTTWKTLQHDRKVKQGQSVDEEDAGDNYGDVIRKPTVTPEQFWDA
FDQKCKEVGGEWSDAADKTWAFGPQKAGACLLLDARKPKPYSSLRVRMQKQIIDEDGAEI
ERVIRDFDNHIETGFQLATFQGPLCAEPVEGMAYFVEQVEVDTESLEKELEQNRMSQVTG
SLISAVRDACRNGLLDWSPRLMLAMYTCEIQAPTDALGKVYAVVAKRRGRITAEEMKEGT
SFFNVTALLPVVESFGFADDIRTKTSGAASPQLIFSGYELLDLDPFWVPTTEEELEDLGE
KADRSNIAKGYMDAVRDRKGMFVDRKIVEFAEKQRTLKR
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggaggttcccgatgctgccaatgttcgtataattaccactcttggacacgttgatcat
ggcaagactacacttatggacgccttgctcgccgcgaacaacatcatttctccacgaatg
gcgggtaagatgaggtatctggacagtcgagaagatgagcaagaacgtggaatcactatg
gaaagcagtgcggtctcgctcaaatttcaggttatggaaaggtctacagatggcggtata
aaaccccgaacgtacgtggtcaatatgattgacacacccggacatgtcgacttttccagt
gaagtatctaccgcctcgaggttatgcgatggagcactcgtcttggttgacgtggtggag
ggagtttgtacgcaaactgttgccgtccttaggcaggcatggcacgatcgcctgcgccca
atccttgtaataaacaagttcgatcggctcattacagagctgaagttgtcgcctatagag
gcataccatcaccttgctcgattaatcgaacaggtcaacgtcgttatgggcaatttcttt
gcatccgagaggatggaagacgaccaacggtggcatgaagaacgggagagacgcctggcg
gagaagaaggacgcaattgctgacgaagccgatgcaactgtcaacgatactgaagaattc
caagaaaaagatgatgaagacatttatttcgccccggagaaaggcaacgtaatttttgct
tctgctcttgatggatggggatttcgtgtgggcaaatttgcccagttgtatgctaagaag
ctaggcatcaaggaggccaatttacgtagagtcctatggggcgactttttccttgaccca
aaaaccaaacgagttatcagctataaacaccttcgaggaagagccctcaaacctcttttt
gtccagtttgtgcttgacaatatctgggctatctatgatgcggtcgtggtgaaccccaat
ccagataaggttgcaaaaattgtgactaccctcgaactcaaaattccacctcgcgatctt
aaatccaaggatacacgacacttactctccctcatttgcacccagtggctctccctgtcg
acatgcatcatccaagctgccattgacatcgttcctactccaccagtagctcaagccacc
agaatacccaaaatgctatatccttatctatacgaggccacacttcaacccagaaataaa
ttggaagaagatctttttacatcaaaatcgggatccaaagcttgtgttgtcgcgtatgtc
agcaaaatgtttgcggtatcttctaaagatttgccagagaacaagaagaagcctttgact
gcggaagaaatgagagaaagagcaagagaagcaagggcagcacgatcagcggaagcaaag
gaggaacaaaagcctactcctcaggaaaatattcctatttcagaagccaaacaactggag
gtggaagaagactccaagaaaaccgatggcgaggtcgtacttggttttgcacgattgtac
tccggtacaatccgtgtagatacttctgtatatgctctacttccaaagtataacacagag
ctggcgccgacacatcccaacaacgttagatacctactcactgcaaaagttgaaagttta
tatgttatgatgggtcgcgagcttgtgcctgtgaccgaggtacatgctggaaatatcttc
gccatcaaagggcttgaatccaaagtatggagaagcgccaccttatgtagcccggacgac
gctggaatagtagatggacgggcatcggaagacaaggactgcttgattaatttaggggca
gtcaacagatcggctgcacccatcgttcgcgttgcattggagccagagaggcctgctgat
atgccgaaacttatcaatgggctcaagcttctcagtcagtcagatccatgcgtcgaaact
ttccaacaacaaacgggagaacatgttatattaaccgctggagagttgcaccttgagcgc
tgcttaaaagatctccgtgaaagatttgccaaggtagaaattcaagcctctaaacctata
gttccctttcgtgaaactgcagtaaaggcgtctgatatggcacctacaaagacacctaat
gcgccgcgtgggaccatccgcggtacaagttcacaaaaagttgtttcttttaccatcaga
gcaagcccacttccacctaccatcatggatttcatccttgaaaacttgacgacgtggaag
accctccagcatgacaggaaagttaagcaaggacagtctgtagacgaggaagatgccggt
gataactacggggatgtgattcggaagcctacagtcacacctgaacaattctgggacgcc
tttgaccaaaagtgtaaagaggtcggaggtgaatggtcggatgcagcagacaagacgtgg
gcgtttggtcctcaaaaggcgggtgcatgcttgttgcttgatgccagaaagccgaagcct
tacagctcgctgagagttcgtatgcaaaaacaaatcattgatgaagacggcgctgagatt
gagagagtgatccgagatttcgataatcacattgaaactggttttcaacttgctaccttt
caaggaccactgtgcgcagaacccgtagaaggcatggcgtacttcgttgaacaggtagaa
gtcgatacagagtcgttagaaaaagaattggaacaaaaccgaatgtctcaagtaactgga
tctttgatatcggccgtaagagatgcttgtcggaatggcttgctagactggtctcctaga
ttgatgcttgcgatgtatacctgcgagatacaagcacctaccgacgctcttggaaaagta
tatgcggtcgttgctaaacgacgtggacgcattacggcggaggaaatgaaagaagggaca
tcctttttcaatgtaaccgcgcttttgcctgttgtggagagttttgggttcgcggatgat
atccggaccaaaacatcgggagcagcgagcccacaactaatctttagcggatatgaattg
ctagatttagacccattctgggtaccaacgacagaagaagaactggaagatcttggagaa
aaggctgaccgttccaacatcgcgaagggatatatggatgccgtacgtgatcgtaaaggc
atgttcgttgacaggaagatcgtagagtttgcggagaagcagagaactctcaaacgatga
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