Psilocybe cubensis (magic mushroom): JR316_0008842
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Entry
JR316_0008842 CDS
T08288
Name
(RefSeq) mRNA export protein mlo3
KO
K12881
THO complex subunit 4
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03013
Nucleocytoplasmic transport
pcub03015
mRNA surveillance pathway
pcub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JR316_0008842
09122 Translation
03013 Nucleocytoplasmic transport
JR316_0008842
03015 mRNA surveillance pathway
JR316_0008842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcub03019
]
JR316_0008842
03041 Spliceosome [BR:
pcub03041
]
JR316_0008842
Messenger RNA biogenesis [BR:
pcub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
JR316_0008842
TREX complex
JR316_0008842
Spliceosome [BR:
pcub03041
]
Complex C
Other components
EJC/TREX
JR316_0008842
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
JR316_0008842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
71975162
NCBI-ProteinID:
XP_047746013
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All DBs
Position
8:complement(1037101..1038601)
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AA seq
212 aa
AA seq
DB search
MDKSLDEIIASKPKAGRRGSSRRSSAREQVLGKPVTTPVQRARAAANPAADSKAVVTQAS
EKIIVSNLPSDVNEAQIKDLFNQTVGALRDITLHYDASGRSKGIATVTFQKKGDGAKAFQ
QYNNRLIDGKRPMKIELVLDPSRPPPLTSRVAPAPAANGRTAGPRPAATRGRRHVRGRGG
ARKNDRPPKTAADLDAEMEDYTAANAPAAAAA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtccctcgacgagattattgcctccaagcccaaggcagggcgccgtggatcc
agccgtcgctcttcagctcgtgagcaagtcctcggaaagcctgtcacaacccctgtgcaa
cgtgcccgtgctgctgccaaccccgccgctgatagcaaggctgttgtcacccaagcatcg
gagaaaatcatcgtttcgaacttgccgagcgacgtgaatgaagctcagattaaggatctg
ttcaaccaaactgttggagcgttgcgtgatatcacccttcattacgacgcctctggacgc
tcaaagggaattgccaccgtcaccttccagaagaaaggtgacggggccaaggctttccag
caatacaataaccgactcatcgatggcaaacgcccgatgaagatcgaactcgtcctcgac
ccatctcgccctcctcccctgacttcccgtgttgcacctgcccccgccgccaatggtagg
actgcaggacctagacccgccgcaactcgtggtcgccgacacgtcagaggtcgaggcggc
gcccgcaagaacgacaggcctcccaagacggccgccgatcttgacgctgagatggaggat
tacactgctgccaatgcacctgctgctgctgcagcctaa
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