Psilocybe cubensis (magic mushroom): JR316_0008988
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Entry
JR316_0008988 CDS
T08288
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03020
RNA polymerase
pcub03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JR316_0008988
09124 Replication and repair
03420 Nucleotide excision repair
JR316_0008988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcub03021
]
JR316_0008988
03400 DNA repair and recombination proteins [BR:
pcub03400
]
JR316_0008988
Transcription machinery [BR:
pcub03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
JR316_0008988
DNA repair and recombination proteins [BR:
pcub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
JR316_0008988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Rio2_N
Motif
Other DBs
NCBI-GeneID:
71975308
NCBI-ProteinID:
XP_047746158
LinkDB
All DBs
Position
8:1535263..1535868
Genome browser
AA seq
150 aa
AA seq
DB search
MNAPARHESYVLEDGEKPVELIEDTKIPNAATIKIVKQDHTLGNMLRAQLLAMPEILFAG
YKVPHPLHPYFLIKIQTDGTKTPQAVLEQACTKLIGTMSSLETKFKREFSYKDIEGTSGG
VTASTGEDPYGTVGGTGGGAWGRGRDYLDF
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccctgctcgtcatgaaagttacgtccttgaggacggcgagaagccagttgag
ctcatagaagatacaaagatccctaatgccgccaccataaagatcgtcaagcaggatcac
acccttgggaacatgttacgagcccaactgctcgctatgcccgagatcctcttcgcaggc
tacaaagtgccacatcctctacacccttacttcctcatcaaaatccaaaccgacggcaca
aagacacctcaagccgtgctcgaacaagcctgtacaaagttgattggcaccatgtcttcg
ctcgagaccaaattcaaacgcgagttctcttataaggacattgaaggaacctccggcgga
gtaacagcttctactggagaagatccgtacgggaccgttgggggaactggtggtggtgca
tggggacgaggacgagactatcttgatttctaa
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