Psilocybe cubensis (magic mushroom): JR316_0010157
Help
Entry
JR316_0010157 CDS
T08288
Name
(RefSeq) DNA mismatch repair protein msh-2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JR316_0010157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcub03400
]
JR316_0010157
DNA repair and recombination proteins [BR:
pcub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JR316_0010157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
71976477
NCBI-ProteinID:
XP_047745550
LinkDB
All DBs
Position
9:2386437..2390645
Genome browser
AA seq
952 aa
AA seq
DB search
MSQMYGNGKEMEDTDQVDPGFISFFTKLPSKSPELGTLRLFLRTSNDQYYAAYGPDAYYV
AQNVYHTNSVIKYLGAGGRSSGLASVSMKVSVAHMLLRDALTTKQLRVEIWVPDAGQGKK
SVKFRLDKEASPGNLQAVEDLLFVNSDFVSAPIVMAIKLATAPLAESTHTKVRSVGVAFA
DTTSREIGVSDFIDNELFSNLESLVIQLSVKEAVIPTGTISGTTDRDIDLNKLRAVLDRC
GVVVTERKPSEFTVKTLSHDLPQLLKSHVGPSSTADSSTTISQLTLPTAPSALSALLLYL
SLLNDTSNHGMYSIKTHDLAQYMKLDASALRALNLVEGPNKLTSNQNTTLFGVLDKCKTA
QGSRLLGTWLKQPLINLHEICKRQNLVQIFANDTNSRRTLQDEYMKAMPDLLRICKRFLK
SIATLEDVVRVYQVVLKIPGMIESLGGIQSDDEQDSVLLEEVYLNGIKECESSLEKYGEM
VEQTLDLKELDNHNYLIKPDYDPRLQELAEKLAEIRDGLDEEHRKTGEELDLELDKKLHL
ENNQDAKNLPKRYIELGTNKSGVYFTTSRLKQHAEDFKEASAAYAKTQHGVVKQVIEIAA
TYTPVLETLNTILAHLDVILSFAHVAVNNQYVKPEVMKQGSGSLVLNEARHPCLELQEGI
AFIPNDVEMIKDKSEFQIITGPNMGGKSTYIRQVGVIVLMAQIGSFVPCASAQIPVFDSI
LCRVGAGDSQLKGVSTFMAEMLETATILRSATRDSLVIIDELGRGTSTYDGFGLAWAISE
YIASQIHAFCMFATHFHELTSLDQQIPHVKNLHVVAHVTESDKGTVDQDIALLYKVEPGI
SDQSFGIHVAELANFPQDVIKLAKKNAQELEDYNDSEPTKEFSPDVVNSGISIMEDFFRK
WSSDNGENGDEDVNMDDDDDDEVQLNNLKKHVNEIRPLIQENPWLQSIITAL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaatgtatggcaatggaaaggaaatggaagacacagatcaagtggatcctggt
ttcatctccttttttacaaaacttcccagcaagtctcctgaattaggaacacttcgactg
tttcttcgcacctccaacgaccaatattacgcggcgtatggacctgacgcatactatgtg
gcacagaacgtttatcacaccaactccgtcattaagtatttgggggcgggtgggcggtcg
tccggtttagccagtgtttccatgaaggtttcagtagcacatatgctacttcgcgatgcc
ctgaccacaaaacagctgagggtggagatttgggtaccagatgcgggccaagggaaaaag
tctgtcaagtttcggttggacaaggaggcatcccccggaaacctacaggctgtcgaagat
cttttatttgtcaattccgacttcgtttctgcacccattgtgatggccatcaaattggcg
accgcgccgttagcggagtccactcacaccaaggttcgatcggtcggagtagcctttgcg
gatacaacgagtcgagagatcggagtctcggacttcattgataatgaattattttcaaac
cttgagtcactcgtcatccaactttccgtcaaagaagccgtcatcccaactggcacaata
tctggcacaactgatcgcgacatagatctcaacaagctgagagctgttttggatcgatgt
ggtgtcgtagtaactgagcgaaagccaagcgaatttacggtgaagactttatcacacgac
ctaccacaacttctgaaaagccatgttgggccatcttcgactgccgattcaagcacaact
atatctcaattgacgttacccaccgctccatccgcactatctgctctgttgctttatcta
tcccttctcaacgacacatccaatcatgggatgtattctatcaaaactcatgatcttgcc
cagtacatgaagctcgatgcaagtgcacttcgagctctaaatttggtggagggaccaaac
aaactgacctccaatcaaaatacaactctgtttggcgttctggacaaatgcaagactgcc
caagggtctcgattacttgggacatggctgaagcaaccgctgatcaatttacatgagata
tgcaaacggcaaaatttagttcaaatcttcgcgaacgatacgaatagccgacgtacactc
caggacgagtatatgaaagccatgccggacctccttcggatctgcaaaagatttttgaag
tcgatagcaacgctggaagacgttgtccgggtctaccaagtggtcctcaagattcctgga
atgatcgaatccctgggtggtattcagtctgacgatgaacaggattctgttctcttagaa
gaagtatatctcaatggtatcaaggaatgtgaatcaagtctcgagaaatatggtgaaatg
gtagagcagacattggatctcaaagagctcgacaaccacaactatcttataaagcctgac
tatgatcctcgtctgcaagagctggcagaaaagttggcagagatacgggacgggttggac
gaagagcatcgcaaaacgggagaagagcttgatctggagctggacaagaaacttcacctc
gagaataaccaggacgccaaaaatctccccaagcgctatatagaactggggaccaacaag
agcggcgtttacttcacaacgagccgcctcaaacagcacgcagaggatttcaaggaagct
tccgcagcttacgccaaaactcaacatggggtagtaaaacaagtcatagaaatagctgct
acttataccccggttttggagacgctaaacactatactggctcatctcgatgtcatcctc
agttttgctcacgtcgcagttaacaatcaatatgtcaaaccggaagttatgaagcaagga
tccggaagccttgtcctaaatgaagccaggcatccctgtctcgaactccaagaagggatt
gcgtttattcctaacgatgttgagatgatcaaagacaaaagtgaatttcaaatcataact
ggacccaacatgggtggaaagtccacctatattcgtcaagtcggagtcatcgttttgatg
gctcagataggctcttttgtaccatgtgcaagcgcacaaatacctgttttcgactctatt
ctctgcagagtgggcgccggagacagtcagctaaaaggtgtatcgacctttatggctgaa
atgctagagactgctaccattcttcggtcagcaacaagagattcgttagtcatcattgac
gaacttgggcgaggtacttcgacgtacgatggttttggactagcatgggccatatccgaa
tatattgcctctcaaatacatgcattttgcatgtttgcaacccatttccatgagctgaca
agtttggaccaacaaattccacacgtcaagaaccttcacgtcgttgcacacgtcacagaa
tccgataaagggactgtcgatcaagatatagccctcttgtataaagtggaaccaggaata
tccgaccagagtttcggcattcacgttgcagagttggctaatttcccgcaagatgttata
aagcttgctaagaaaaacgcacaagagctagaagattacaacgatagcgaacccaccaaa
gaatttagtcccgatgttgtcaattccggaatcagcataatggaagattttttccgaaaa
tggtcctcagacaacggagagaatggcgacgaagatgtgaatatggacgacgacgacgac
gacgaagtccagctcaacaacttaaaaaagcatgtgaacgaaatccgcccactcattcag
gagaacccgtggttacaatcgatcatcactgccctgtag
DBGET
integrated database retrieval system
