Psilocybe cubensis (magic mushroom): JR316_0010195
Help
Entry
JR316_0010195 CDS
T08288
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03430
Mismatch repair
pcub03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JR316_0010195
03460 Fanconi anemia pathway
JR316_0010195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcub03400
]
JR316_0010195
DNA repair and recombination proteins [BR:
pcub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
JR316_0010195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
MCM_bind
Motif
Other DBs
NCBI-GeneID:
71976515
NCBI-ProteinID:
XP_047745587
LinkDB
All DBs
Position
9:2505775..2509207
Genome browser
AA seq
823 aa
AA seq
DB search
MSEPKPIRRLDENLINKIAAGEIIHRPASALKELVENSLDAGATSIKVTVKDGGMKLLQI
QDNGCGIRKSDLPILAERFTTSKLSTFSDLSRIATYGFRGEALASISHVARLSVVTKTKP
DSCAWKATYVDGSLVDAKTGEKADPRPCAGNDGTTITIEDLFYNTPTRLSALRSSSEEYA
RILDVLTKYAIHNPTVSFLCKKAGSPSPDLSTPSRSDTPTAIRLLYGHSIAKELVHHTVS
SSIKKKRKGRQTEEDMDVDGEDEEEDQMQAEDTDLQSESESWSAEAYFSNANYQAKKMVF
LLFINHRLVESPRMKRALEACYVSVLPKGTAPFVYLSLQIDPRAVDVNVHPTKREVHFLN
EEQITERIADAVQMCLAKGNASRRFEYQTTLMGGILGDEDARAPPASVTSSRKRSRKERD
QNSSGDEYGEEEVEGNIETSGVSVSTSTETQRKVYSHHKVRTSVRDRTLDSMFPIAHSQT
SQAPPGAVESPLSPGVSNTTMAAEGVTAAASPNTQTNLKSREVKESQCFLTSVKTLRQKL
VKGKHPQLTEILEKHIFIGIVDLKRCLSLIQCSTKLYLVNHDALAEELFYQLGLRQFGDM
SRIKLDPAPSLHELVQIAVDAEDTIEGTKLTKAEIVQRIVKVLVDRREMLAEYFSLTITE
DARVESIPLLLRDYIPNLDNLPSFLMRLGPQVDWSSEMECFETFLRELAYFYVPTPPTPD
PDEQESGIVHDASSKDLMNGKNPEAETAGDERDGKDNAKPNEKDLYKSERWQIQHILFPA
MRRYLIAPKSLLDRDVVQIANLPDLYKGFDTYIRELSTNVSIV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaccaaaacccatacgccgccttgacgagaatcttatcaacaaaattgcagca
ggagagatcattcacagaccggcttctgcgttgaaagaactcgtcgagaacagtcttgac
gctggtgcgacctccatcaaagtcacagttaaagatggtggtatgaagctgttgcagata
caggataatggatgtggaatacgcaaatcagatctccctattctcgctgaacgttttaca
acatctaaactatccactttctccgacctctctcggattgcaacctatggttttcgtgga
gaagccctcgcgtctatatcacatgttgcacgcctttctgtcgtcacaaagaccaaacct
gactcttgtgcgtggaaagctacatatgtcgatggatctttggtagatgctaaaacaggg
gaaaaggcagacccacgtccatgtgccgggaacgacgggacgaccatcacgatagaagac
ctattctacaacactccgacgcgcctttctgcactacgaagctcttctgaagaatatgca
cggattcttgacgtcctcaccaaatacgcgatccataatcccaccgtgtcattcctctgt
aaaaaggcagggtcaccttctccagatctctcgactccctctaggtcagatacacctacg
gccattcgactattatatggacactctattgcgaaagagttggtccaccatacggtttcc
tcgtcaatcaagaagaaacggaaaggtaggcagacagaggaagacatggacgtagatggc
gaagatgaagaggaagaccaaatgcaggcagaagataccgatttacaatcagagtcagag
tcatggtctgccgaggcatacttcagcaatgcgaactaccaagcaaaaaagatggtcttt
ctcctttttatcaatcacaggctcgttgaatcgccacggatgaagagggcacttgaagcg
tgttatgtgagtgtgcttcccaaagggacagcgccgtttgtgtacctcagtctccagatc
gatccgcgcgccgttgacgtcaacgtccacccgaccaagcgggaagtgcattttctgaac
gaggagcagatcaccgagcgcattgcggatgcggtgcagatgtgtttggccaaggggaat
gctagtaggcgatttgaatatcagacaaccttgatgggtggtattcttggtgatgaagat
gcaagggcacctcctgcgtctgtgacaagttcgaggaagagatcgaggaaggagagggac
cagaattcatctggagatgaatacggagaagaagaggtagaagggaacatagaaacttct
ggtgtttcagtttccacatccaccgagacgcaaaggaaggtatactcacatcataaagta
cgcacatccgtgcgggaccggacattggattctatgtttcctatcgctcactcacaaacg
agccaagcgcctcctggagcagtcgaatcgcctttgtctcccggtgtttcaaatactacc
atggcagctgagggagtaacagcagcagcgagtccaaatacacagacaaatcttaaatca
agagaagtgaaggagtcacaatgctttctgacgagcgtaaaaactttgaggcagaagctt
gtaaaaggcaaacacccacaattgacagagattctggagaaacatatcttcatcggcatt
gtggatctgaagcgttgtctctcactcatacagtgttcgaccaaactgtatttagtcaac
cacgatgcacttgccgaggagctattttaccagcttggtctgaggcagttcggggacatg
agtaggatcaagctagacccagcaccatcgttgcatgagctcgttcaaattgcagttgac
gcggaggacaccattgaagggacaaagctcaccaaggccgaaattgttcagcgtatcgtc
aaggttcttgtggacagacgcgagatgctcgcggagtacttttcccttacgattaccgaa
gacgcacgcgtagagagtatcccgctactgttgagggattacatcccgaatttggataat
ttaccgagctttctcatgagacttggcccacaggtcgattggtcttctgagatggaatgt
ttcgaaacctttctccgcgagctcgcgtacttttatgtcccgactcctccgactcctgat
cctgacgaacaagaatcaggtatagttcatgatgcctcgagtaaagatctaatgaacgga
aaaaatcctgaagcagagaccgcaggggacgagcgcgacggcaaagacaatgcgaaacca
aatgaaaaggacctgtacaaatctgagcgatggcaaatccagcatattctgttcccagct
atgcgtcggtatttgatcgcgcccaaatcactactcgaccgcgatgtcgtgcagatcgcg
aacttgcctgatttgtataagggcttcgacacttatattagggagctttctaccaatgtt
tcgatcgtgtga
DBGET
integrated database retrieval system