Psilocybe cubensis (magic mushroom): JR316_0010826
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Entry
JR316_0010826 CDS
T08288
Name
(RefSeq) DNA-directed RNA polymerase III subunit
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JR316_0010826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcub03021
]
JR316_0010826
Enzymes [BR:
pcub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JR316_0010826
Transcription machinery [BR:
pcub03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
JR316_0010826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
71977146
NCBI-ProteinID:
XP_047744535
LinkDB
All DBs
Position
10:1791097..1795352
Genome browser
AA seq
1141 aa
AA seq
DB search
MVQQDEESEWDQLNRTNWKGLGLTDPIKNIEDKWLLLPAFLKVKGLVKQHIDSFNYFVDT
DIKNIVKANNKVTSDVDPRFWLKYTDINVGFPDRNEENAIDKRVTPNECRLRDITYSAPI
VVTIQYTRGKNIVQRNVHIGRLPIMLRSNKCVLTGRSEEQLARMIECPLDPGGYFVVKGT
EKVILVQEQLSKNRIIVEIDNVKGIVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSIHE
DVPIVIALKALGIQSDKEILLLTAGNTDAYKNIFAANLEDAAKLGVFTRQQALEYIGTRV
KINRRVMGPRRPAWEEALEALATIVLAHVPVKGLDFRAKAIFVATMTRRVLMAMEDEKMV
DDRDYVGNKRLELAGQLLALLFEDLFKTYNSNLKIAIDKVLKKPSRTTEFDAFNTMRMQG
DHLTTGFVRAISTGNWSLKRFKMERAGVTHVLSRLSFIAALGMMTRISSQFEKTRKVSGP
RALQPSQWGVLCPSDTPEGEACGLVKNLALMTHITTDVDEEPIIRLAFMLGVEDICLTTG
TEIYGPHTFVVNVNGTIIGVTRQPTRFVAQFRKLRRARRCSEFISIYINNHQRAVHIACD
GGRICRPAIIVENGRPRVRSEHIRLLKQGKAMFEDFLQKGLVEYLDVNEENDTYIALYES
DINPNTTHLEIEPFTLLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQFNRIDTL
LYLSVYPQQPMVKTKTIELVGYDKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGYGR
CQVLRKNATLVRKYPNGTFDRLADAPLDETGQIAKKYDIIQADGLAGVGERVDPGDVYVN
KQSPSNATDHAFTGQAASVPYKNTPLTYKSPVAGNIDKVLITDTDNDQTLIKVLIRQTRR
PELGDKFSSRHGQKGVCGLIVNQEDMPFNDQGINPDTIMNPHGFPSRMTVGKMIELLAGK
AGVLTGKLQYGTAFGGSKVEDMSRLLIENGFSYAGKDMLTSGITGEPLEAYVYFGPIYYQ
KLKHMVMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERLMI
SSDKFEVNACSECGLMGYNGWCTYCKSSKKMAQLTIPYAAKLLFQELMAMNVVPRLILDD
A
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaacaggatgaagaatctgaatgggatcagctcaatcgaaccaactggaagggc
cttggactgacagatccaataaaaaacatcgaggacaaatggttacttttgccagccttt
ctcaaagtgaagggtcttgtgaagcaacacattgattcgttcaactactttgtggataca
gacatcaagaatatcgtcaaggccaacaacaaagtaacttccgacgtggatccacgattc
tggctgaaatacactgacatcaatgttggttttcccgaccgcaatgaagagaacgcgatt
gacaagagagtcacacctaacgaatgccgtctccgagatataacctacagcgcacctatc
gttgtgactatccaatacactcgtggaaagaacatcgtgcagcgcaatgtccacatcggt
cgactacctatcatgctacggagcaataaatgtgtcctgactggacgatcagaagagcag
ctagcgcgaatgatcgaatgcccgctggatcctggtggctacttcgttgtgaagggtact
gaaaaggttattttggttcaagagcagttgagcaaaaatcggataattgtggaaatagat
aatgtcaagggaatcgtgcaggcttcctgtacatcgtcaacccacggaggtctgaagtcc
aaaacttatgttgcgacaaagaagggcaaaatctatcttcgacacaactcaatacacgaa
gacgttcccatcgtaattgctctcaaagctcttggtattcaatcggacaaagaaatcctt
ctcctcacagcgggaaataccgacgcatacaaaaatatatttgctgccaatctcgaagac
gcagccaaactcggcgtatttacgcggcaacaagcgcttgaatacattggcacccgtgtc
aagatcaatcggcgtgtaatgggacctcgtagacccgcatgggaggaggcactggaggca
ctggctaccattgtgctagcacacgttcctgtcaaaggccttgatttcagagcgaaggca
atttttgtcgcgacaatgactcgtcgtgttctaatggccatggaagacgaaaagatggtt
gacgatcgtgattatgttggaaacaagcgtttagaattggccggccagctacttgcttta
ctattcgaagatttattcaagacatacaactccaaccttaaaattgcaatcgacaaagtt
ctcaagaaaccttcccgtacaaccgagtttgatgccttcaacacaatgcgaatgcaaggc
gaccatcttaccactggatttgttcgtgccatttccacgggtaattggtccctaaaacga
tttaagatggagagagctggtgtgacgcatgtgcttagtcgtctcagttttatcgccgcc
cttggcatgatgacccgtatatcgtctcaattcgaaaagacgagaaaggttagcggtcct
cgagcacttcaacccagtcagtggggtgttttgtgtcccagtgacacccccgaaggagaa
gcttgcggtctcgtgaagaacttagctttgatgacacacatcacgactgatgtagatgaa
gaaccgatcatccgtctagcattcatgctgggcgtagaagatatatgcctcaccacaggc
acagagatatacggccctcacaccttcgttgtgaatgtaaacggaactataattggtgtt
actcgccaaccaacacgatttgtcgcccagtttagaaaattgcgaagagcgcgacgatgt
agcgaattcattagcatatatatcaataatcaccagcgtgccgtccatatcgcttgcgat
ggtgggcgtatatgtagaccagctattattgtggagaatggcagaccgagggtgcgctcg
gagcatatacgtcttcttaagcaaggcaaggcaatgttcgaggactttttgcagaaaggt
ctggttgaatacttggatgttaacgaggaaaacgacacctacattgctctctacgaatct
gacatcaatcccaataccactcatctcgagattgaaccgtttaccctccttggcgccgtc
gctggtctaattccttatccccatcataatcagtcacctcgaaacacataccaatgtgcc
atgggaaaacaagccatcggcgctattgcctacaaccaattcaaccgtatcgacaccctt
ctctacctctctgtttatccgcagcagcctatggttaaaacgaaaaccatcgaactggtc
gggtatgacaaacttccggccggtcaaaatgcaacggtcgcggtcatgagttactctgga
tatgatatcgaggatgctcttattttgaataaggcaagcttggatcgtggttatggtcgg
tgtcaagtgcttcgcaaaaatgcgactcttgttcgaaaatatcctaacggaacgtttgac
cgtctggcagatgctccgctcgacgaaacaggtcaaattgccaaaaaatatgacatcatt
caagccgatgggcttgctggtgtcggggaacgagttgatccaggggatgtttatgtcaac
aaacaatcgccctcgaatgccacagatcacgcgtttacggggcaggctgcatcggttccg
tataagaacacgcctttgacgtacaagtctcctgtggcagggaacatcgacaaagttttg
atcactgataccgataacgaccaaactcttatcaaagttcttatccgtcaaacgcgacga
ccagagctgggagacaagttctcgtcgcgccatggacaaaaaggtgtatgtggtcttatt
gttaaccaagaggatatgcccttcaatgatcagggtatcaatccggatacgatcatgaac
cctcacggtttcccttctcgtatgacggttggaaaaatgatcgaacttctcgctggcaag
gctggtgttttgaccggaaaattgcagtacggtaccgcttttggtggatccaaggttgag
gatatgagccgactcctcatagagaatggatttagctacgctgggaaagatatgcttact
agtggcattaccggtgaacctttagaagcttatgtatacttcggacccatctactaccaa
aaactgaaacatatggttatggacaaaatgcatgctcgagctagaggtccacgtgcaact
cttactcgacaacccacggaaggtcgatcccgagagggagggttacgtctaggcgagatg
gagcgtgactgtctcatcggctacggtgcgacacaattgctacttgagcggttgatgata
tcttcggataaatttgaggttaacgcatgttcggagtgcgggctaatggggtacaacggc
tggtgtacttactgcaagagctcgaaaaaaatggcccaactcacgatcccatatgctgca
aaactgctgttccaagagttgatggcaatgaatgttgtgccccggctgatactcgacgat
gcatga
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