Psilocybe cubensis (magic mushroom): JR316_0010936
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Entry
JR316_0010936 CDS
T08288
Name
(RefSeq) Flap endonuclease GEN-like protein 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcub03400
]
JR316_0010936
DNA repair and recombination proteins [BR:
pcub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
JR316_0010936
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Gene cluster
GFIT
Motif
Pfam:
GEN1_C
XPG_I
XPG_N
Motif
Other DBs
NCBI-GeneID:
71977256
NCBI-ProteinID:
XP_047744645
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Position
10:<2165594..>2168739
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AA seq
992 aa
AA seq
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MGVTGLWELLRPAAKTRSLTELAITEGFKANPDGKRGFRIGIDASIWFFHAEYGREGENP
VLRTLFFRCATLMHTTFLPIFVFDGPKRPDVKRGKKINKTGHKLIPGMKNIIEAFGFEWR
MAPGEAEAELAYLNRIGVIDAVLSDDVDNFLFGATTVIRNSSNTLSGNKANPALNLAGKD
DKNHTRVFRSEDLKDHPEVRLTRGGMILIGLLAGGDYHTAGVPRCGKITAHGLAKCGFGD
SLYDAAVNLDREDLDEFIVNWRRDLIQEIRTNSMGQIGKKQPSLASSFPADFPDIDILLS
YVKPITSESMGRESNNLSITWSREPDLGKLAATCEMYFEWGYKEAIIKRFKTIMWHPIVL
RILRRAVLDRHDNRPSEFPSTPRKSGTAIPCGTPSKMIAHKFSSMAINTERTYISGSESE
DEEEEGRLIVKVHGKRKHTSTDGLLEYRLEIAPKQLVQLAESGVKGLRSPEGPDEWASEP
EGDDDDEDGAAVPKKRGKGPTVHPHTHWRVWMPACMVQIVEPGLVKEFEDIENGKAQKKA
EKEARKAAKLNAPPKSATVSKSPKKAKKKSAANSGGECDEDVIALPKKPTNHRKVVKKST
TSCGDQDGDDEAALSIPNVPTKAAKKNTSKPSVEDFEDIFSSPLSKKSQTDNTGKGKPPS
LQFNLYDDIPLPSSDDEDELPTYLMAGKKPSLKGKEPAMDSSDDDEIEIVESKVKPHVDS
TRRRISDKANTDRSLKSFFPVGKSTGAKNSKSAASFSGSSSRPSSSTSATTYSSNFTDPC
KENIPSVATNSTIIDDVLIKSKDGKKSRGGNKKASADKASKTRRPFSVDTDDSSCGEYDT
AAWGKGRAVDVPNRAPSSPSKRKSSKSWSSPSESDSQDRVKKSPRKQLAHTSPMPAPRPV
SPSPGRVRPLVQPLWKISDEVIDICTDAESDHDLPSRIRPRTVQTTLKFPLAPKAKFKPS
TESLKTTSLSWKGSRTTHQKVHTIISDVIDLT
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttactggtctctgggagcttcttcgtccggcggccaaaacacgatctttgaca
gaactcgctattacagaaggcttcaaagccaatccagatggcaaacgcggttttcggata
ggcatcgacgccagcatctggtttttccatgccgagtatgggagggagggcgagaacccg
gtgttgcgcacactgttctttcgatgcgcgacactcatgcacacgacgtttctacctatc
tttgtcttcgatggaccgaagcggccggatgtgaagagggggaaaaagatcaataagacg
gggcataagctcataccgggcatgaagaatatcatagaagcctttgggtttgagtggagg
atggcccctggagaagctgaagctgaacttgcttatttgaatcgaattggggtgattgac
gctgttctctcagacgatgtggacaactttttgtttggtgccacaacagtgattcgaaat
tcaagcaacacgctctctggaaataaggccaatccagcactcaacttggcagggaaggac
gacaaaaaccatacgcgcgttttccgaagtgaagacctcaaagatcatccggaagtgagg
cttactcgtggtggtatgattctgattggacttttggcgggaggagactatcataccgct
ggtgtacctcgctgcgggaaaattaccgcccatggactcgccaaatgtggatttggagat
tctctttacgacgcagccgttaatctcgaccgcgaagacctcgacgaattcatcgtgaat
tggcgtcgagaccttattcaagagatcagaaccaattctatgggccaaattggaaagaag
caaccctcattggcgagctcttttcctgcggattttccagacattgacattttgctctcc
tatgtcaaacctatcacatcggagagtatgggtagggagagtaataacctttcaataacg
tggtcgagagagcccgatctcgggaaactcgctgcgacgtgtgagatgtattttgagtgg
gggtacaaagaagccatcattaaacggttcaagactatcatgtggcatcctatcgttttg
cgcatcctacgtcgagcggtcctcgatagacatgacaatcgaccatctgaattccccagt
accccgcgtaagagcggaacagcgattccttgcggcacaccgtcgaagatgatagcgcac
aaattttcctcgatggcgattaacaccgaaaggacttatatatctggctcggagtcagaa
gatgaagaggaggaaggcaggctcattgtcaaagtccacggcaagcgaaagcatacatcg
actgatggactccttgaatatcgcctggaaatagcacccaagcagcttgttcagctcgca
gagagtggtgtgaaaggcctgcgatccccagaaggaccggatgagtgggcctctgaaccc
gagggagatgacgatgacgaagatggggctgctgtgccaaagaaacgggggaaaggtcct
actgttcatccacatacgcattggcgggtatggatgccagcttgcatggtccagatagtg
gaacctggactggtaaaagagttcgaagatattgaaaatgggaaggcacaaaagaaagcc
gagaaggaggcgagaaaggccgcaaagttgaacgcaccgccgaaatcagcaacagtgtca
aaatcacctaaaaaggccaagaagaaatctgccgcgaactctggaggtgaatgtgatgag
gatgttattgctttgcctaaaaagccgaccaaccataggaaggtggtgaaaaaatctact
acgtcctgtggtgaccaagacggagatgacgaagctgcactttccatacccaatgttcct
acgaaggctgcaaagaaaaatacgagcaaaccatcagtggaagattttgaagatatcttt
tcatcccctttgtcgaagaagtctcaaactgataacacgggcaaaggcaaacctccgtct
ctgcaatttaacttgtacgacgacatacccttgccatcaagcgacgatgaggacgagctt
cccacgtatctaatggctggaaagaaaccgtcgctcaagggcaaagagcctgccatggac
tccagtgacgacgacgagatagagatagtcgaatcgaaggttaagccccatgtcgactct
acaagaaggaggatttccgacaaagccaacacagataggtccctgaagtcatttttccct
gttgggaaatccacgggcgcgaagaattcgaagtcagcagctagtttctcaggcagttca
tccagaccttcatcatcaacgtctgccaccacatattcttcgaatttcacagatccatgc
aaagagaatatcccatcagttgctacaaactcaactattatcgatgacgtcctcatcaaa
tctaaagacggcaagaaatcccggggtggcaataaaaaagccagtgctgacaaagcatcc
aagacgagaagaccgttttctgtagacactgacgattcttcctgtggcgagtacgacact
gccgcctggggtaaaggccgagctgtggacgtgcctaatcgcgctccttcatcaccttca
aagagaaagtcgtctaagagctggagctcgccgtctgaatcagattctcaagatagagta
aagaaatctccccgaaaacaattggcacatacatcgccaatgcctgcccctcgccctgtg
tctccgtctcctggaagggtacgacccctagtacagcctttgtggaaaatcagcgacgaa
gttatcgatatttgcacagatgcagaatcggaccatgatctacccagccgaatccgacct
cgaactgtacaaactactctcaaatttccacttgcgccaaaggcaaagttcaaaccatcc
acagaatcactgaaaacaacatccttatcttggaaaggttctcggactactcaccagaaa
gtacataccatcatttccgatgttattgatctcacttga
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