Psilocybe cubensis (magic mushroom): JR316_0012421
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Entry
JR316_0012421 CDS
T08288
Name
(RefSeq) Transcription elongation factor S-II
KO
K03145
transcription elongation factor S-II
Organism
pcub
Psilocybe cubensis (magic mushroom)
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcub03021
]
JR316_0012421
Transcription machinery [BR:
pcub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
JR316_0012421
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Zn_ribbon_Elf1
HI0933_like_1st
DUF6335
Motif
Other DBs
NCBI-GeneID:
71978741
NCBI-ProteinID:
XP_047742935
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All DBs
Position
12:complement(<1352866..>1354365)
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AA seq
341 aa
AA seq
DB search
MSDTVIELKKAVKQLQTAVNDQEIIAILSTLKQKQITEVILRESKIGLAVGKLRQHASKP
VADLAKEIVKHWKTAVEKAKTKPAGSANAAADKKTTNSATTPVTPSGNSANAAVRTAKGD
GVTGKTGDKTRDKCVEIIYDALAIDATAPIETVSQKAHEIEKCVLNNMKGVTPEYKAKIR
SLFVNLKDKSNPSLRASIVEGSLSPEKFSKMTSQEMASEERKAADEQIQKDNFFKSLSAA
EKQAETDAFQCSRCKQRKCVYRQQQTRSADEPMTTFVTCTVCQNKYVYTPNSTNFQVLTS
CLDGNFHRFLSDYYLSIICISRPPYASILSTLLNPKPSRDL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatactgtgatagaactcaaaaaagccgtgaaacagttgcaaaccgctgttaat
gatcaggagataatagcaatcttgtctactctgaagcaaaaacaaataacagaagtgatt
ctaagggagagcaagattggattggcggtcggtaaactcagacaacatgcttcgaaaccc
gtggccgatctcgccaaagagattgtaaagcattggaaaacagcagtagagaaggcgaag
accaaaccagccggttctgcgaatgctgccgcagacaaaaagacaacaaacagcgcaaca
acaccggtcacaccctctggtaactcggcgaatgctgcagtacgcaccgcgaagggagac
ggtgtcactgggaaaacgggagacaagacaagagacaagtgtgtggaaatcatttatgat
gctcttgccatcgatgccaccgcccccattgaaactgtatcccagaaagctcacgaaatc
gagaaatgtgtcttgaacaacatgaagggcgtcaccccggagtataaagctaaaattcgc
tctctgttcgtcaatctcaaggataagagcaacccaagtcttcgagccagcatagtggaa
ggctctctttcaccagagaagtttagcaagatgactagtcaagaaatggcatccgaggaa
agaaaggccgctgatgaacagatccaaaaagacaatttcttcaaatctctgtcggccgca
gagaagcaggcagagacggatgcgttccagtgttcgaggtgcaagcagcgtaaatgtgtc
tatcgtcaacaacaaacacgaagtgctgatgaaccaatgacaactttcgtcacgtgcacc
gtttgccagaacaagtatgtttacacgcccaattctactaatttccaagttttaacgtca
tgtctagatggaaattttcataggttcctctcggattattatttatctattatatgcatt
tctcgtccaccctatgccagcatcctctctactcttttgaatccgaaacccagccgcgat
ctctag
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