Psilocybe cubensis (magic mushroom): JR316_0012502
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Entry
JR316_0012502 CDS
T08288
Name
(RefSeq) Valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JR316_0012502
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcub01007
]
JR316_0012502
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcub03016
]
JR316_0012502
Enzymes [BR:
pcub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
JR316_0012502
Amino acid related enzymes [BR:
pcub01007
]
Aminoacyl-tRNA synthetase
Class I (U)
JR316_0012502
Transfer RNA biogenesis [BR:
pcub03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JR316_0012502
Prokaryotic type
JR316_0012502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
FAZ1_cons
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
71978822
NCBI-ProteinID:
XP_047743016
LinkDB
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Position
12:complement(1660593..1665100)
Genome browser
AA seq
1077 aa
AA seq
DB search
MSDSAVTPASAPAPAPPAEAAAAPIDPNNVRDPNSKSAAKKEAKRLEKEAKLAAKAAKAP
AAPAKPKGEKKEKEKEKEKEVEQPFVNTTPKGEKKDLSQPMAAGYNPLAVEAAWYDWWSA
QGFFKPEYVLPTTPLAPGAPDTRDTFVIPAPPPNVTGSLHIGHGLTVAIQDGLVRWNRMR
GRRTLFAPGFDHAGISTQSVVEKRLLKKEGKTRHDLGRERFLETVMDWKNEYQGRITNQL
HRLGGSYDWDRVAFTMDENLSKAVIETFCRLHEDGIIYRANRLVNWCVKLNTTLSNLEVD
QKELEGRTLLNVPGYDPKEKFEFGVLTSFAYEIEGSDERIVIATTRPETMLGDTAIAVHP
DDTRYKHLHGKFVKHPFIPTRRIPIIADTLADMEFGTGAVKITPAHDPNDYEVGKRHNLE
FVNILNDDGTINANGGSAFAGMKRFHARVEVVKRLKDLGLYVEQKDNKMQIPVCSKSGDI
IEPMLKPQWWVNCQPLADEAIKRTRAGELIINPKQSENEWYRWLENIQDWCISRQLWWGH
RCPAYFVRFADGLNPDGKTAQDQSDGASWVVGRTREEAEARAREIAKGREFVLEQDEDVL
DTWFSSGLWPFSIMGWPQKTLDLERFYPSSLLETGWDILFFWVARMVMLGAYLTNSMPFK
EVYCHAMIRDAHGRKMSKSLGNVIDPIDVIQGLGLEELHKKLEEGNLDEKEVAKAKAGQK
KDFPRGIPQCGTDALRFALCAYSGGGRDINLEILRVEGYRKFCNKIFNATKFAMLKLDEE
FVPQPSLKPTGNESLVEKWILHKLNVAAKEINAQLEERNFMSATNAVYNFWLYELCDVYI
EAMKPMTDESAPAATRKSAQQTLYTCLDSGLRLLHPFMPFVTEELWQRLPRMPNDPTPSI
MVAQFPVNDDAFVFEEAEKQFDLVFSTLKAARSLAASYTLQSDIQFFIQVKSEEEEALFT
PQTATIVALSKGCKSAKVVRDAADIPAGCGSAVVTPSIIVHVLVRGLVDLDNEIAKCDKK
LDLAKMNLQKVVKLESQPEYKETVPANVRAANTDKRKTLEAEIATLETSRNMFAQLK
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattctgctgtgacgcctgcgtctgcacctgcacctgcgcctccagctgaggct
gctgctgccccgatcgaccctaacaatgtgcgcgatccgaattcgaagagtgctgcgaag
aaggaggcgaagaggttagagaaggaggcgaagcttgcggcaaaggcggccaaggctccc
gctgcgccagcaaagcccaaaggcgagaagaaggaaaaggaaaaagagaaggagaaggag
gttgagcagccgtttgtgaatacaacacccaaaggcgaaaaaaaagatttgtcgcagcct
atggcggcggggtacaaccccctcgcagtcgaggcggcatggtacgactggtggtccgcg
caaggcttcttcaaacccgaatacgtgctccccaccacccccctcgcaccaggggcgccc
gacacgcgcgacacgttcgtgatccccgcgccgccgcccaacgtcaccggctcgctgcac
atcgggcacgggctgacggttgccatccaggacgggctcgtgcgctggaaccgcatgcgc
gggcgcaggacgctcttcgcgccgggctttgaccatgcgggcatctcgacgcagagtgtc
gtggagaagaggctgttgaagaaggagggcaagacgaggcatgatctcggacgcgagagg
tttttggagactgttatggattggaagaatgagtatcagggaagaattacgaatcagctt
catagacttgggggaagttatgattgggacagggtcgcgtttactatggacgagaacctg
agcaaagccgttatcgagactttctgcagacttcacgaagacggcatcatctaccgcgcc
aaccgcctcgtgaactggtgtgtaaagctcaacacgacactctcaaatctcgaggtcgac
caaaaggaattggagggccgcacgctgttgaatgtccccggatacgacccgaaggaaaag
ttcgagtttggtgtgctgacgagtttcgcgtatgagattgagggtagcgatgagcgcatc
gtgattgctacgacgcgtcctgagactatgcttggtgataccgctatcgctgtgcacccc
gatgacacgcgatacaagcacctgcacggcaaattcgtcaagcaccctttcatccccacc
cggcgcatccccatcatcgccgacacactcgccgatatggagttcggcacgggtgcagtc
aaaatcacgcccgcgcacgacccgaacgactacgaagtcggcaagcgccacaacctcgag
ttcgtgaacatcctcaacgacgacggcaccatcaacgcgaatggcggcagcgcctttgcg
ggcatgaagcgcttccatgcgcgtgtggaggttgtgaagaggcttaaggacctcgggctg
tatgttgagcagaaggataataagatgcagattcctgtgtgcagcaagtctggggatatt
attgagcctatgcttaagcctcagtggtgggtcaactgccagcctttggctgacgaggct
atcaagcgcacccgcgccggcgagctgattatcaaccccaaacaatccgaaaacgagtgg
taccgctggctcgagaacatccaggactggtgcatatcgcgccagctgtggtggggccac
cgttgccccgcgtactttgtgcgcttcgcggacgggctgaacccggatggaaagacggcg
caggaccagagcgacggtgcgagctgggtcgtgggcaggacgagggaggaggcggaggcg
cgtgcgagggagattgcgaaggggcgagagtttgttttggagcaggatgaggatgtgttg
gatacgtggttcagctcgggcttgtggcctttctcgatcatgggttggccgcagaagacg
cttgaccttgagaggttttacccctctagtttgttggagactggatgggacattttgttc
ttctgggttgcgcgcatggtcatgctcggcgcgtacctcaccaactcgatgccgttcaaa
gaggtgtactgccacgccatgatccgcgatgcgcacgggaggaagatgtccaagtcgctg
gggaatgtcatcgaccccatcgatgttatccagggactggggctcgaggagctgcataag
aagttagaggagggaaatttggatgagaaggaggtggcgaaggccaaggcggggcagaag
aaggacttcccgaggggtattccccagtgcgggacggacgcgctgaggtttgcgctttgt
gcttattccggtggaggacgtgatatcaacttggagattctgcgtgtggagggttacagg
aagttctgtaataagatcttcaacgcgaccaagtttgcgatgttgaagctcgatgaagag
ttcgtgcctcagccttcgctcaagcccactggaaacgagagtctcgttgaaaaatggatt
ttgcacaagttgaatgttgctgctaaggagatcaacgcgcagcttgaggagaggaacttt
atgtccgccacaaacgccgtgtacaacttctggttgtacgagctgtgcgatgtgtacatc
gaagcaatgaagcccatgacagacgaatctgcgcccgctgcgacccgcaagtccgctcag
cagactctgtacacctgcttggacagcgggttgaggctgctgcaccccttcatgccgttc
gtcaccgaggagctgtggcagcgtctccctcgcatgccgaacgatcctacaccttcgatt
atggtggcccaattccctgtgaacgatgatgcgtttgtgtttgaggaggctgagaagcag
tttgatcttgtgttctcgacgctcaaggctgcgcgatcgttggcggcttcgtataccctc
cagagcgatattcaattcttcattcaagtcaagtccgaagaggaggaagccttgttcacc
ccccagacagcgacaatcgttgctctctccaagggatgcaagagtgccaaggttgtgagg
gacgccgcggacatcccagccggctgtggaagtgcagtcgttacgccttctatcatcgtt
cacgttctcgttcggggtcttgtggatctggacaacgaaattgccaagtgcgacaagaaa
cttgatcttgcaaagatgaatctgcaaaaggtcgtcaaactcgagtcgcagcctgagtat
aaggagaccgtacctgcgaacgtgcgcgctgccaacacagacaagcgcaaaacactggaa
gcggaaattgcaactttggaaacaagcaggaatatgtttgcgcaattgaagtaa
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