Psilocybe cubensis (magic mushroom): JR316_0013076
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Entry
JR316_0013076 CDS
T08288
Name
(RefSeq) meiotic recombination
KO
K10865
double-strand break repair protein MRE11
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03440
Homologous recombination
pcub03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JR316_0013076
03450 Non-homologous end-joining
JR316_0013076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcub03032
]
JR316_0013076
03400 DNA repair and recombination proteins [BR:
pcub03400
]
JR316_0013076
DNA replication proteins [BR:
pcub03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
JR316_0013076
DNA repair and recombination proteins [BR:
pcub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
JR316_0013076
BRCA1-C complex
JR316_0013076
NHEJ (non-homologous end-joining)
MRX complex
JR316_0013076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Metallophos_2
Fringe
Motif
Other DBs
NCBI-GeneID:
71979396
NCBI-ProteinID:
XP_047742237
LinkDB
All DBs
Position
13:complement(1091246..1094245)
Genome browser
AA seq
741 aa
AA seq
DB search
MSLSPDSFTPPPRNGIQTAYPDDTIKIMLATDNHIGYMERDPIRGQDSINTFKEILELAV
KHEVDFILLAGDLFHENKPSRDCLYKVSALLREYTLGSKPVEIELLSDPLEGQADGFSFP
AINYEDPNLNVAIPVFSIHGNHDDPQGAGAEGALCALDILSVSGLVNYMGKIDLPLSDAE
APTTGIAVKPVLLRKGNTRLGLYGIGNVKDQRMHFELRSNRVRMFMPKDKDKWFNMLLLH
QNRVKHGPQEFVPEGMFDENIDLVVWGHEHDCRIIPEPVAGKKYYITQPGSSVATSLADG
EAIEKHVALLQIQGKEFGLTPIPLRTVRPFVIEQLVLNEVADDEGINLNDQMSITKFLKA
KVNNLIEQADQIWEERNTKALAEGEPEVPRMLPLVRLKVDTTGVTETSNPIRFGQEFQGR
VANPRDLLVFHRSKKPVARGAAGHRVHADEPELSIDDPGLTNAEKLSKIRVGTLVREYLV
AQELQCLGEGGMSDAIQLFVEKDDANAIQMHVNKSLKNLLSKCSGTEDVELGEEEVDDLL
DKAKEQQEKEYQEQYRVAQAKAAEKKKKDNEKDSDKESVDSMMMDLDIDAGDSEFDQLDS
EDERPPPKKRGAAATTTTTARSRAKAPAKAPAKAPAKRAPAKGKGKKVQSDSDDVIDLDN
DEEDDDVEEEEAPKPVKRTNRLAVLSQPAAKKAPAKKKAATPAPKQSQLTFAPAARSSGT
RTAATKARGKKVVDDDDFDDD
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtccccagacagcttcacgcccccgccgcggaatggcatccagacagcttac
cccgatgacaccatcaaaatcatgctcgcgacagacaaccatattggttatatggagcgc
gatccaataagagggcaagactctatcaacaccttcaaagaaattctagaactggccgtc
aagcacgaagtcgatttcattttgcttgccggtgatctgttccatgaaaacaagccctcg
agagattgcctttacaaagtatcagcactgctgcgcgagtataccctagggagcaaacca
gtagaaatcgaactcctaagtgatccactggaaggacaggctgatggtttttcattcccc
gcgatcaactacgaagaccccaacctcaacgttgccatacccgtgttctcaatacacgga
aaccacgacgatccacaaggggcaggagccgaaggtgcactatgcgctctagatatcttg
tcagtgtcaggccttgtcaattatatggggaagatcgacctcccgctctctgacgccgaa
gctcccaccacagggatcgcagtgaagcctgtcctccttcgcaagggtaacaccaggctg
ggcctgtacggcatcggaaatgttaaggaccagaggatgcactttgagctcagaagtaac
cgcgtgcggatgttcatgcccaaagacaaggacaaatggttcaacatgttactactgcat
caaaacagagtcaagcatggaccgcaggagtttgttccggagggaatgtttgacgagaat
attgacttggtcgtctggggacacgaacatgattgccgaattatcccagaaccagtggcg
ggcaagaaatactacattacccaacctggttcatcagtggccacatcccttgccgatgga
gaagccattgagaagcacgtagcactgttgcagatccagggcaaggaattcggattgacc
cccattcctcttcgcacagtacggccttttgtgattgagcagttggtgctgaatgaggtg
gccgatgacgagggaattaatcttaatgaccagatgtctattactaaattcttgaaagca
aaggttaacaacttgatcgagcaggcggatcaaatatgggaagaacgcaacacaaaagca
ttagcagaaggggaaccggaagtcccacgcatgctccctctcgtccgtctaaaggtcgat
acaacaggtgtcaccgaaacctccaacccgatccgcttcggacaggaattccaagggcgc
gtcgctaacccgcgcgacctgctcgtcttccaccgcagcaagaagcctgtagcgcgcggg
gcggcaggccatcgtgtgcatgcggatgagcctgagctgagcatcgacgacccgggcctg
accaacgcggagaagctctccaaaatccgcgttggcacgctcgtgcgggagtatttggtt
gcgcaggagttgcagtgcttgggtgaaggcggcatgtcggatgcgatccagctgtttgtg
gagaaggatgatgcgaatgctattcaaatgcatgtgaacaagtcgttgaaaaacctatta
agtaaatgttcgggcaccgaggacgttgagctgggtgaggaggaagtcgatgatctgcta
gacaaagcgaaggaacaacaagaaaaggagtatcaggaacaataccgtgtagcgcaagct
aaggctgctgagaagaaaaagaaagataatgaaaaagattcggataaggagtctgttgat
tcgatgatgatggacctcgatatcgacgcgggcgactccgagttcgaccagcttgactcg
gaggacgagcggcctcctcctaagaaaaggggtgcagcagctaccactactacgacggct
aggtccagggcaaaggctcctgccaaagcacccgcgaaggcgccagcaaagagggcacca
gcgaaagggaagggcaaaaaagttcaaagcgactcggatgatgtgattgatttggacaat
gatgaggaagatgatgatgttgaggaggaagaagcccccaagcctgtgaaacgtactaac
cgattggctgtactcagccaacccgccgcgaagaaagcgcctgcgaagaaaaaggcagcc
acccccgctccgaagcagagccagctcacgttcgctcccgctgcgcggtcatccggcacc
cgcacagctgcgacaaaggcgagagggaagaaggttgttgacgacgatgatttcgatgac
gattga
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