Pseudomonas cucumis: PSH97_00300
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Entry
PSH97_00300 CDS
T09632
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc03030
DNA replication
pcuc03410
Base excision repair
pcuc03420
Nucleotide excision repair
pcuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSH97_00300 (polA)
03410 Base excision repair
PSH97_00300 (polA)
03420 Nucleotide excision repair
PSH97_00300 (polA)
03440 Homologous recombination
PSH97_00300 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcuc03032
]
PSH97_00300 (polA)
03400 DNA repair and recombination proteins [BR:
pcuc03400
]
PSH97_00300 (polA)
Enzymes [BR:
pcuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSH97_00300 (polA)
DNA replication proteins [BR:
pcuc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSH97_00300 (polA)
DNA repair and recombination proteins [BR:
pcuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSH97_00300 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSH97_00300 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
WLG85012
LinkDB
All DBs
Position
complement(67697..70465)
Genome browser
AA seq
922 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDAMFAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSALDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYRLATIKIDVPLDFGLDDLHMGPPDHEKLAELYSLLEFKSWFEENQRDAKRAGQDI
VEVVQEQPGAAEAKYETVLDRARFEAWLDKLDKAPLIAFVTETNGTDAQHSQLVGLAFSV
AANEAAYIPLTHSYMGVPEQLDRDTVLLALKPLLENPNKLKVGQHAKFETNILANCAIGG
DQSNGIIVQGIAYDTMLESYVLDSTATRHDMDSLALKYLGQSKTDIQGIAGKGVKQLTFD
QISLELAGPYAAEDADVTFRLHLALQEKLAATPSLGKVLNEIEMPLMPVLARIERQGALV
DANLLGIQSVELGEKLIALEREAFAIAGEEFNLGSPKQLGMILYEKLGLPVLSKTAKGQA
STAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINARTGRIHTSYQQAVAAT
GRLSSIDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHA
FRNNLDVHRATAAEVFGVELDAVTNDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA
YIDRYFARYPGVLEYMERTRAQAAEQGFVETIFGRRLYLPEINAKNQALRKAAERTAINA
PMQGTAADIIKKAMVAVDNWLTSSGLDAKVILQVHDELVLEVREDLVDQVREEIRVHMSS
AAQLDVPLLVEVGVGNNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcttcttatctgtaccgcgcctttcac
gcgctgccaccgctgaccacgtccaaaggcctgccgaccggtgcggtgaagggcgtattg
aacatgctcaagagtctgcgcaagcagtacccggacagcccgttcgccgtggtattcgac
gccaagggcgggacgttccgcgacgcgatgttcgccgaatacaaggccaatcgcccaagc
atgcccgacgacatgcgggtccagatcgagccgctgcacgccagcgtcaaggccctgggc
tttccactgctatgcgtggacaacgtcgaagcggacgacgtgatcggcactctggcccgc
agcagcgcggccgccgaccgtccggtggtgatctccaccggcgacaaggacatggcgcaa
ctggtcgacgggcacattaccttggtcaatacgatgaccggtagcgcgctggacgtggaa
ggcgtgaaggagaaattcggcgtcgctcccgagcagatcatcgattacctggcactgatg
ggcgattcatccgacaacatcccgggcgttccgggtatcggtccaaagaccgcttccggt
ctgctggtcggtgtgaacggtggcctgaccgagctctatgcgcagctcgacatcgtcccg
accctgccgattcgcggcgccaagacactgccggccaaactcgaagagcataaggaaatg
gcctttctttcttatcggttggcaaccatcaagatcgacgtaccgctggacttcggcctc
gacgacctgcatatgggcccaccggatcacgaaaaactcgccgagttgtattccctgctg
gagttcaaaagctggttcgaagagaaccagcgcgatgccaagcgcgcaggtcaggacatt
gttgaagtcgtccaggagcagccgggagcagccgaagcgaagtacgaaaccgtcctcgac
cgggcgcgtttcgaggcctggctggacaagctcgacaaggcaccgttgatcgccttcgtc
accgaaaccaatggcaccgatgctcaacattcgcaattggtgggtctggcgttttccgtc
gcggccaacgaagcagcctacatcccgctgacccattcctacatgggcgtgccggaacag
ctggatcgcgacactgtactgctggcgctgaaaccgctgctggaaaacccgaataagctg
aaagtcggccaacacgccaagttcgaaaccaatatcctcgccaactgcgccatcggtggt
gatcagagcaacgggattattgttcagggcatcgcctacgacaccatgctcgagtcttac
gtcctggactcgacggccacccgtcacgacatggacagcctggcgctcaagtacttgggc
caaagcaagaccgacattcaagggatcgcgggcaaaggcgtcaagcagctgaccttcgac
cagatctcgcttgagctggcgggcccctatgctgccgaagatgccgatgtcaccttccgg
ctgcacctggctttgcaggaaaaactggcagcaacgccaagcctgggcaaggtgctcaac
gagattgaaatgccgctaatgccggttctggcccgtatcgagcgccaaggcgcactcgtg
gacgccaacttgctgggcatccagagcgtcgaactgggcgagaaactgatcgcccttgag
cgtgaggcctttgccattgccggtgaggagttcaacctcggttcgccgaagcaactgggc
atgatcctctacgaaaaactcggtttgcccgtactcagcaaaaccgccaagggccaggca
tcgactgccgaagcggtgttggccgagttggccgaacaggactacccgctgcccaaggtg
ctgatgcaataccgctcgctgagcaagctcaaaagcacctacaccgaccgtttgccagag
cagatcaacgctcgcaccgggcgcattcatacgtcttaccagcaagccgtcgccgccacc
ggacgtttgtcgtcgatcgacccgaacctgcagaacattccgattcgcaccgccgaaggt
cgtcggattcgtcaggcgttcgtcgcgcccaaaggctacaagctgctggccgcggactat
tcgcaaatcgaactgcggatcatggcgcatctggccaaggacgaaggcttgctgcacgcc
ttccgcaacaacctcgatgtacaccgcgctacagcagcggaggtgtttggcgtcgagctc
gacgcggtcaccaacgatcagcgtcgcagtgccaaagccatcaacttcggcctgatctac
ggcatgagcgcgtttggactggccaagcagatcggcgttgaccgtaaacaatcccaggcc
tacatcgaccgttacttcgcccgttatcccggcgtgctggaatacatggagcgcacgcgc
gcccaggccgccgagcaaggtttcgtcgaaaccatcttcggccgtcgtctctacctgccg
gaaatcaacgcgaaaaaccaggccctgcgtaaagctgccgagcgcacggcgatcaacgcc
ccgatgcaaggcaccgcggcggacatcatcaaaaaagccatggtagcggtggataactgg
ctgacatcgtccggccttgacgccaaagtcatcctgcaggtgcatgatgaattggtgctc
gaggtgcgagaggacttggtcgaccaggtccgtgaggaaattcgcgtgcacatgagcagc
gccgcacagctggatgtaccgcttctggtcgaggtaggtgtaggcaacaactgggatgag
gcgcactaa
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