Pseudomonas cucumis: PSH97_00625
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Entry
PSH97_00625 CDS
T09632
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSH97_00625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcuc03021
]
PSH97_00625
Transcription machinery [BR:
pcuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSH97_00625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_23
HTH_29
HTH_24
GerE
HTH_40
HTH_11
Xre-like-HTH
HTH_Tnp_ISL3
PapC_N
Motif
Other DBs
NCBI-ProteinID:
WLG85071
UniProt:
A0ABY9EYR8
LinkDB
All DBs
Position
complement(131327..131827)
Genome browser
AA seq
166 aa
AA seq
DB search
MSSPEFAVQALYSSHHGWLNTWLRARLGNAADAADLAQDTFVRLLQRTERLELKAPRAFL
RTIARGLVIDHWRREEIERAYLETIAHLPEAETPSAEAQALVLELLESIARMLEGLKPKV
RQAFLLAQCEGLTHKQIAEHMGLSLRSVERYVADALYHCYVLRYEA
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacctgagtttgcagtacaggcgctctacagcagtcatcacggttggctcaat
acgtggctgcgcgctcgattgggcaatgcggccgatgcggccgacctggcccaggacacg
ttcgttcgtctgctgcaaagaaccgaacgcctggagctcaaggccccccgcgcctttcta
cgaaccatcgcccgcggcttggtgatcgaccattggcgccgtgaggaaatcgagcgtgcg
tacctggaaaccatcgcccatttacccgaggccgaaaccccgagcgccgaggcgcaagca
ttggtgctcgaattgctggaaagcatcgcccgcatgcttgaaggcctgaagccgaaagtg
cgtcaggcgtttctgctggcccagtgcgaaggacttacccacaagcagatcgccgaacac
atgggattatccctacgctcagtggaacgctatgtggccgacgcgctgtatcactgctac
gtgctgcggtatgaagcgtga
DBGET
integrated database retrieval system
