KEGG   Pseudomonas cucumis: PSH97_01295
Entry
PSH97_01295       CDS       T09632                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pcuc  Pseudomonas cucumis
Pathway
pcuc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pcuc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSH97_01295
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pcuc02022]
    PSH97_01295
Two-component system [BR:pcuc02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   PSH97_01295
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA_2 HTH_50 HTH_8 FleQ AAA DUF6716 AAA_16 HTH_10
Other DBs
NCBI-ProteinID: WLG85191
LinkDB
Position
complement(294295..295689)
AA seq 464 aa
MSIDNRIQVVLIDDDPHLRQALSQTLDLAGLKILPLAEAKGLAGQLERDWSGVVVSDIRM
PGMDGLELLTELHAQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRR
ALDLRRLVLDNRSLRLALSDRNELSARLVGQSAPMLRLREQIGALAATKADVLILGETGA
GKEVVARALHDLSSRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFAN
GGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQSADQGR
FRADLYYRLNVAPLRIPPLRERGEDALMLFQHFADEASARHGLPPHELQPGHRALLLRHT
WPGNVRELQNAAERFALGLELALDNSAPNGGVGSTIEVVNGGLSEQVENFEKSLIAAELA
RSHSSVRSLAEALGIPRKTLHDKLRKHGLNFADGGAGNPTDDID
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgagcatcgacaaccgcatccaggtcgtgttgatcgacgacgatccccatctgcgccaa
gccctgagccagaccctggacctggccggcctgaaaatcctgccgctggctgaagccaag
ggcctggccgggcaactcgaacgcgactggtcgggggtagtggtcagtgacatccgcatg
ccgggcatggacggtctcgaactgctgaccgaactccacgcccaggacccggagctgccg
gtgctgctgatcaccggccacggcgatgtgccgctggcggtacaagccatgcgcgcaggg
gcctatgactttctggaaaaacctttcgccagcgacgccctgctcgacagcgtacgtcgt
gccctggacctgcgccggctggtgctggacaaccgcagcctgcgtctggccctgagcgat
cgcaacgaactgagcgctcgactggtcgggcaatcggcgccaatgctgcgcctgcgcgag
cagatcggtgcactggcggcaaccaaggccgatgtactgatccttggcgaaaccggtgcg
ggcaaggaagtggtggcccgcgcgctgcacgatctgtcgagtcggcgtaacggcccgttc
gtggcgatcaacgccggggctcttgccgagtcagtggtggaaagcgagctgttcggtcac
gagcccggcgccttcaccggcgcgcagaagcgtcgcatcggcaagttcgaattcgccaac
ggtggcacgttgttcctcgatgaaatcgaaagcatgagcctggacgtgcaggtgaaactg
ctgcgcttgctgcaagagcgggtggtcgagcgcttgggtggcaaccagctgatcccgctg
gacatccgcatcatcgccgcgaccaaggaagacctgcgtcaatccgctgatcaaggccgt
ttccgtgccgacttgtattaccgcctgaacgtcgcgccgctgcgcattccgccgctgcgc
gagcggggcgaagatgcgctgatgctgttccagcatttcgccgacgaagccagcgcgcgc
cacggtttgccgccccacgaattgcaaccggggcaccgggcgttgctgttacgccatacc
tggcctggcaatgtgcgcgaactgcagaacgccgccgaacgctttgccctaggcctggaa
ctggcgctggacaatagcgcgccgaatggcggcgtaggcagtacgattgaagtggtcaac
ggcggtctgagcgagcaagtggagaacttcgagaagagcctgattgccgccgaactggcg
cgctcgcacagctccgtgcgcagcctcgccgaagcgctcggcattccacgcaaaaccttg
catgacaaactgcgcaagcatggtctgaacttcgccgacggcggtgccggcaaccccact
gacgatatcgattga

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