Pseudomonas cucumis: PSH97_01305
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Entry
PSH97_01305 CDS
T09632
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc00521
Streptomycin biosynthesis
pcuc00523
Polyketide sugar unit biosynthesis
pcuc00541
Biosynthesis of various nucleotide sugars
pcuc01100
Metabolic pathways
pcuc01110
Biosynthesis of secondary metabolites
pcuc01250
Biosynthesis of nucleotide sugars
Module
pcuc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSH97_01305 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PSH97_01305 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PSH97_01305 (rfbC)
Enzymes [BR:
pcuc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PSH97_01305 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WLG85193
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All DBs
Position
complement(297601..298146)
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AA seq
181 aa
AA seq
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MNVVTTDLPGVLIIEPKVFGDERGFFYESFNAKAFEEATGLNTQFVQDNHSRSQKGVLRG
LHYQLENTQGKLVRVTVGEVLDVAVDIRRSSPHFGKWVAVRLSADNHRQLWVPEGFAHGF
VVLSDFAEFLYKTTDYYTPSAERSIRWDDPDLGIDWQLDEAPKLSAKDQSAAFFKDAEVF
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagtcaccaccgacctgcccggtgttctgatcatcgaacccaaggtatttggt
gacgagcgcggtttcttctatgagagcttcaacgccaaggctttcgaagaggcaaccggc
ctgaacacccagttcgttcaggacaaccattcccgctcgcaaaaaggtgtactgcgcggt
ttgcattaccaactggagaacactcagggcaaactggtccgcgtcaccgtcggtgaagtg
ttggacgtggcggtggatattcgccgcagctcgccgcatttcggcaaatgggtggcggtg
cgcctgtccgccgacaaccatcgccaactctgggtgccggaaggttttgcccatggtttc
gtggtgctgagcgatttcgccgagttcctctacaaaaccaccgactactacaccccgtcg
gccgagcgcagcattcgctgggacgatccggatttgggtattgactggcagctggacgaa
gcaccgaagctgtcagctaaagatcagtccgccgcgttcttcaaggacgctgaagtcttt
tcctga
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