Pseudomonas cucumis: PSH97_05055
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Entry
PSH97_05055 CDS
T09632
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSH97_05055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcuc02000
]
PSH97_05055
Transporters [BR:
pcuc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSH97_05055
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Ral
Motif
Other DBs
NCBI-ProteinID:
WLG85898
LinkDB
All DBs
Position
complement(1163449..1164600)
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AA seq
383 aa
AA seq
DB search
MLVHKTALLSAITTALLASASLQAAEPLKAVGAGEGQLDIVAWPGYIERGETDKAYDWVS
GFEKETGCKVNVKTAGTSDEMVTLMAKGGYDLVTASGDASLRLIAGKRVQPINTALIPNW
KNLDPRLKDAPWYVVDKQTYGTPYQWGPNVLMYNTNVFKQPPTSWGVLFEEQKLSDGKSN
KGRVQAYDGPIYIADAALYLKTAKPELGITDPYLLDEKQYKAVLELLRAQQKLIHRYWHD
TTVQMSDFKNEGVVASSSWPYQVNGLMNEKQPVASTIPKEGATGWADTTMLHAEAKHPNC
AYKWMDWSLTPKVQGDVSAWFGSLPAVPAACTGNELLGAEGCKTNGFDQFDKIAFWKTPQ
AEGGKFVPYSRWTQDYIAIMGGR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgcacaagaccgcactgctcagtgcaatcaccacagcgcttttggccagcgcc
agcctgcaggccgccgagccgctgaaggccgtcggtgccggcgaaggtcagctggatatc
gtcgcctggccgggctacatcgaacggggcgaaaccgacaaggcctacgactgggtcagc
ggtttcgagaaggaaaccggctgcaaggtcaacgtcaagaccgccggcacgtccgatgaa
atggtcaccctgatggccaagggcggttacgacctggtgacggcgtccggcgacgcctcc
ttgcgcctgatcgccggcaaacgtgtgcagccgatcaacaccgcactgatccccaactgg
aaaaatctcgatccgcgcctgaaggatgcgccctggtacgtggtcgacaaacagacttat
ggcactccctatcaatggggcccgaacgtgctgatgtacaacaccaacgtgttcaaacag
ccgccgaccagttggggcgtgctgttcgaagagcagaagctgtccgacggcaaatccaac
aagggccgcgtacaagcgtatgacggcccgatctacatcgcggacgcggcgctttacctg
aaaaccgccaagccggaactgggcatcacggatccttacctgctcgacgaaaaacagtac
aaggccgttctcgagctgctgcgcgcccaacaaaagttgatccaccgctactggcacgac
accaccgtacaaatgagtgacttcaagaacgaaggcgtggtggcttcaagctcctggccc
tatcaggtcaacggcctgatgaacgagaaacagccggtcgcctcaaccattccgaaagaa
ggcgccaccggatgggccgacaccaccatgttgcacgccgaggccaagcacccgaactgc
gcttacaagtggatggactggtcgctcacgccgaaggtccagggcgatgtgtccgcctgg
tttggctcgctgccagcggttccggcggcgtgtaccggaaacgaactgctgggggccgag
ggttgcaagaccaacggtttcgaccagttcgacaagatcgccttctggaaaaccccacag
gctgagggcggcaagttcgtgccttacagccgctggacccaggattacattgcgatcatg
ggtggtcgctaa
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