Pseudomonas cucumis: PSH97_05245
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Entry
PSH97_05245 CDS
T09632
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc00300
Lysine biosynthesis
pcuc01100
Metabolic pathways
pcuc01120
Microbial metabolism in diverse environments
pcuc01230
Biosynthesis of amino acids
Module
pcuc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSH97_05245 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcuc01002
]
PSH97_05245 (dapE)
Enzymes [BR:
pcuc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PSH97_05245 (dapE)
Peptidases and inhibitors [BR:
pcuc01002
]
Metallo peptidases
Family M20
PSH97_05245 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
WLG85934
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Position
complement(1204354..1205505)
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AA seq
383 aa
AA seq
DB search
MTAHADLSPTLQLAIDLIRRPSVTPIDADCQKQMMQRLGDAGFKLEPMRIEDVDNFWATH
GKHEGPVLCFAGHTDVVPTGPVTAWQIDPFNAVIDEHGMLCGRGAADMKGSLAAMTVAAE
RFVADYPDHKGKVAFLITSDEEGPAHHGTKAVVERLAARKERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQ
ISNVNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQKRVADILDKHALDWHIDWALSGLP
FLTEPGALLDAVSASIKDVTGRETKASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLAADLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctttcgccgaccctccaactcgccatcgacctgatccgtcgt
ccgtccgtgacgccgatcgacgccgattgccagaagcagatgatgcagcgcctgggcgat
gccggtttcaaactggaaccgatgcgcatcgaagatgtggataacttctgggcgactcac
ggtaaacacgaaggcccggtgctgtgcttcgccggccacaccgacgtggtcccgaccggt
ccggtaaccgcctggcagatcgatccgttcaacgcggtgatcgacgagcacggcatgctt
tgcggtcgtggcgcagcagacatgaaaggcagcctcgcggccatgaccgtagccgctgag
cgcttcgtcgccgactacccggaccacaagggcaaggtcgctttcctgatcaccagcgat
gaggaaggcccggcgcatcacggcaccaaggctgtggttgaacgcctcgccgcccgtaag
gaacgtctggactggtgcatcgtcggcgaaccgtcgagtacgaccctggtgggtgacgtg
gtcaagaatggccgtcgcggctccctcggcgccaaactgaccgtacgcggtgtgcagggt
cacgtggcctatccgcacctggcaaagaacccgatccatctcgctgccccggcgctggcc
gaactggccgccgagcactgggaccacggcaacgatttcttcccgccaaccagtttccag
atttccaacgtcaattccggcaccggcgcgaccaacgtgatcccgggtgatctggtggcg
gtgttcaacttccgcttctccaccgaatccaccgtcgaaggcctgcaaaaacgcgtcgcc
gatattctcgataagcatgctctggactggcacatcgactgggcgctgtccggcctgccg
ttcctcaccgaaccgggcgccctgctggacgcggtatcggcgagcatcaaggacgttacc
ggtcgcgagaccaaggcgtccaccagcggcggtacctccgacgggcgcttcatcgcgacc
atgggaactcaagttgtcgagctgggcccggtcaatgcgacgatccaccaggtcaacgag
cgcgtactggcggccgaccttgatgtgctgaccgaaatctactaccagaccctgatcaag
ttgctcgcctga
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