Pseudomonas cucumis: PSH97_05745
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Entry
PSH97_05745 CDS
T09632
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcuc
Pseudomonas cucumis
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcuc03009
]
PSH97_05745 (rimO)
Enzymes [BR:
pcuc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PSH97_05745 (rimO)
Ribosome biogenesis [BR:
pcuc03009
]
Prokaryotic type
ribosomal protein modification factors
PSH97_05745 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
WLG86029
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All DBs
Position
complement(1300657..1301994)
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AA seq
445 aa
AA seq
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MSTTPAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHDAVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKAGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLNWLTEAQLDRVGCFQYSPVEGAPANLLDAAIVPDDVK
QDRWDRFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcctgcgccggccaatccaaaggttggcttcgtatccctgggttgcccg
aaagcactggtcgactccgagcgcatccttacccagctgcgcatggaaggctatgacgtt
gtgtccacttatcaggacgccgacgtcgtggtggtcaacacttgcggctttatcgactcg
gccaaggctgagtcccttgaagtgattggcgaagccatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgtcgaagaaggcaacatccgcaacgtgcacccaagcgtattg
gccgtgaccggtccgcagcagtacgagcaagtggtcaacgccgtgcatgacgccgtgccg
ccgcgtcaggatcacaacccgctgatagacctggtgccgccgcaagggatcaaactgacc
ccgcgccactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaaactggtcagccgcccggtcggtgatgtgctcgacgag
gcccagcgcctggtcaaggccggcgtcaaagagctgttagtgatttcccaggacaccagc
gcctacggcgtcgacgtgaaataccgcaccggtttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactctgcgaagccctgagcaccctcggcgtctgggtgcgtctgcactac
gtttacccgtacccgcacgtcgacgagctgatcccgctgatggccgccgggaaaatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtcctgaaagccatgaaacgc
ccggccttcgaagacaagaccctggcgcggatcaagaactggcgcgaaatctgcccagac
ctgatcatccgttcgaccttcatcgtcggcttccccggcgaaaccgaagaagacttccag
tacctgctgaactggctgaccgaagcccagctggaccgcgtcggctgcttccagtactcg
ccggtcgaaggcgcaccggccaacctgctggacgcggccatcgtgccggacgacgtcaag
caagaccgctgggaccgcttcatggcgcaccagcaggccatcagctcggcgcgcctgcaa
atgcgcatcggccgtgaaatcgaagtgctggtcgatgaagtcgacgagcaaggcgcggtc
ggccgttgcttcttcgatgccccggaaatcgacggcaacgtgttcatcgacaacggcagc
aacttgaagccgggcgacaaagtctggtgcaaagtgaccgacgccgacgaatacgacctg
tgggctgaacagatctaa
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